Pairwise Alignments

Query, 213 a.a., Nitrogen regulation protein NR(I), GlnG (=NtrC) from Variovorax sp. SCN45

Subject, 202 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  138 bits (348), Expect = 6e-38
 Identities = 71/194 (36%), Positives = 120/194 (61%), Gaps = 4/194 (2%)

Query: 14  IHLIDDDQAVRDSLSLLIGTVGLRVQGWADPLAFIDGFDRASVGAIVLDVRMPGVSGLTV 73
           ++L+DDD+A+ DSL  ++   G +VQ ++    F+        G ++LD RMP ++G  V
Sbjct: 7   LYLVDDDEAILDSLGFMLRQFGYQVQTFSSGRDFLAQCPLTQAGCVILDSRMPEITGQEV 66

Query: 74  LDRLMALGVDQPVIMLTGHGTVEMCRRAFKAGAAEFLEKPVDDEQLLEALQQAVRQHVRS 133
             +L+       VI LTGHG + M   AF+ GA +F +KPV  + L++A+++A ++    
Sbjct: 67  QQKLLETQSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIKKAHKE---- 122

Query: 134 RQRSQADNAARERVAQLSEREREVLAFIVQGLTNKEIARVLALSPRTVETHRANLFAKLD 193
            Q S    + + + AQL++RE++VLA +VQG+TNK+I+  + LS RT+E HRA +  KL+
Sbjct: 123 SQASFEQQSLQHKFAQLTDREQQVLAHVVQGMTNKQISEAMYLSLRTIEVHRAKIMKKLE 182

Query: 194 CDSLAQLIRRYAVL 207
             ++A+L++  A L
Sbjct: 183 VSNMAELVQHLAHL 196