Pairwise Alignments

Query, 489 a.a., ATP-dependent RNA helicase Bcep18194_A5658 from Variovorax sp. SCN45

Subject, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

 Score =  342 bits (877), Expect = 2e-98
 Identities = 184/364 (50%), Positives = 240/364 (65%), Gaps = 5/364 (1%)

Query: 5   FSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLSGQDVMGAAQTGTGKTAAFSLPLLQR 64
           F++L L+ P+ +A+ E GY T +PIQ QAIP VL+G+DVM AAQTGTGKTA F+LP+L+ 
Sbjct: 3   FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62

Query: 65  MLKHENASTSPARHPVRALVLLPTRELADQVAQQIKLYAKYTNLRSTVVFGGIDMKPQTL 124
           + K      +     VRAL+L PTRELA Q+   + LY ++  L+S VVFGG+ + PQ  
Sbjct: 63  LAKGPKVRANQ----VRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQ 118

Query: 125 ELKKGVEVLVATPGRLLDHIEAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYLPKQ 184
            + KG ++LVATPGRL+D         +Q+E +VLDEADRMLD+GF+ D+ +IL  LP++
Sbjct: 119 RMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEK 178

Query: 185 RTTLLFSATFSPEIKRLASSYLQNPITIEVARPNETASTVEQHFYSVSDDDKRRALKQIV 244
           R  LLFSATFS EI+ LA   + NP+ I V+  N TA TVEQ  Y      K   L ++V
Sbjct: 179 RQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLV 238

Query: 245 RQRGITQAFVFVNSKLGCARLARSLERDGLRTTALHGDKSQDERLKALASFKAGEVDLLV 304
           ++    Q  VF+ +K G  RLA  L   GL   A+HG+KSQ  R +ALA FKAGEV +LV
Sbjct: 239 KEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILV 298

Query: 305 CTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSFASGGNDARLVAD 364
            TD+AARG+DI  +P V NF++P  AEDYVHRIGRTGRAG  G A+S  S      L A 
Sbjct: 299 ATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFA- 357

Query: 365 IEKL 368
           IE+L
Sbjct: 358 IERL 361