Pairwise Alignments

Query, 489 a.a., ATP-dependent RNA helicase Bcep18194_A5658 from Variovorax sp. SCN45

Subject, 503 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  320 bits (821), Expect = 6e-92
 Identities = 186/440 (42%), Positives = 268/440 (60%), Gaps = 23/440 (5%)

Query: 3   SSFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLSGQDVMGAAQTGTGKTAAFSLPLL 62
           S+F  L L+E +   ++  G+E  TPIQ QAIP+VL   D++G AQTGTGKTAAF LP++
Sbjct: 2   STFKELGLSEHIVATLSANGFEKPTPIQAQAIPLVLKDHDLIGLAQTGTGKTAAFGLPMI 61

Query: 63  QRMLKHENASTSPARHPVRALVLLPTRELADQVAQQIKLYAKYTNLRSTVVFGGIDMKPQ 122
           ++++        P    +RALVL PTREL +Q+A  +KL+ K + L+  +V GG+ +  Q
Sbjct: 62  EKLVAD---GRRPDPRNIRALVLAPTRELVNQIAANLKLFVKKSPLKIGLVVGGVSINKQ 118

Query: 123 TLELKKGVEVLVATPGRLLDHIEAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYLP 182
           T +L +GV++LVATPGRLLD +  K   L Q  Y+VLDEAD+MLD+GF+ DL++I   +P
Sbjct: 119 TEQLARGVDILVATPGRLLDLVSRKAVTLTQARYLVLDEADQMLDLGFIHDLRKISKLVP 178

Query: 183 KQRTTLLFSATFSPEIKRLASSYLQNPITIEVARPNETASTVEQHFYSVSDDD-KRRALK 241
           K R TLLFSAT    I  LA  YL +P+ +EV+ P + A  VEQ+ + V   D K   LK
Sbjct: 179 KNRQTLLFSATMPKLIAELAGEYLTDPVKVEVSPPGKAADKVEQYVHFVPGKDLKTTILK 238

Query: 242 QIVRQRGITQAFVFVNSKLGCARLARSLERDGLRTTALHGDKSQDERLKALASFKAGEVD 301
           Q +       + +F  +K G  +L + L+  G +  ++HG+KSQ +R +AL +F+ GE+ 
Sbjct: 239 QTLTANPDGLSLIFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIR 298

Query: 302 LLVCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSFASGGNDARL 361
           +LV TDVAARG+DI  V  V+N+D+P   + YVHRIGRT R G  G+A++F +  ++ RL
Sbjct: 299 VLVATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRIGRTARNGRDGIAIAFCA-PDEIRL 357

Query: 362 VADIEKLIKKKIELEPVEFEEDRPR-GRINDGRRHWREEGEAGDARDVLDQPRERSSSLS 420
           + DIEKL+  +I +   E   D+ R  +   GR + +  G          QPR      +
Sbjct: 358 LRDIEKLMGIQIAVASGEAPADQARPSKGRGGRGNGQPRGNG--------QPRG-----N 404

Query: 421 GDARRGGG----RPHRAPAA 436
           G  +R GG    RP R  AA
Sbjct: 405 GAGQRQGGPRRDRPQRQAAA 424