Pairwise Alignments

Query, 363 a.a., ABC transporter, substrate-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) from Variovorax sp. SCN45

Subject, 364 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  281 bits (720), Expect = 1e-80
 Identities = 137/340 (40%), Positives = 202/340 (59%), Gaps = 3/340 (0%)

Query: 22  AFSQPQVPLKIGFVYVTPVTDAGWVRQHEEGRKAVEAALGDKVKTTYVENVSEGADAERV 81
           +F+  + PLKIG VYV+P+ + GW +QH  G  A++   GDKV  T ++N+    DAERV
Sbjct: 27  SFAGAEEPLKIGVVYVSPIAEIGWTKQHSLGVDAIKKEFGDKVAITVIDNIFMPQDAERV 86

Query: 82  IRDLAQQGNRLIFTPSFGYMEPTLKVAKDFPDVKFESITGYKTAPNVATANARYYEGRYL 141
            R+LA  GN+LIF  SF +  P  KVA  FP   FE  +G     N+ T  A+YYEG ++
Sbjct: 87  FRELAASGNQLIFGTSFSHGTPMQKVAPRFPKTAFEHCSGIVHRANLGTFEAKYYEGTFV 146

Query: 142 AGIAAGRMTKTNVAGYVAGFPIPEVLQGINAFTLGMRSVNPNAKVHVVWLNEWFDPPKER 201
           AG A G M+K+   G++ GFPIP+++   NA  LG +SVNP    + ++LN WFDP KE+
Sbjct: 147 AGAAGGHMSKSGKIGFIGGFPIPDIVGPANALLLGAQSVNPEVTCNAIFLNSWFDPGKEK 206

Query: 202 DAAMALFNQNADVVAFHTGSTAVMSAAQERGKLAIAYHSDMRKIAPDAQIVAVTHQWGGY 261
           +AA  L +Q  DV+   T +   +  A E G  +I Y SDM K     Q+ A T  W   
Sbjct: 207 EAANTLLSQGCDVICSMTDTATGVQVAGEGGAWSIGYASDMAKFGSGKQLTAFTLDWSSE 266

Query: 262 YTQRAKAVLDGTWKSGNLWGGVKEGMIRVGDFGSKVPKTVQDEVLARQKDIAAGKLQPFR 321
           Y + AK V +GTWK+   W G+  G++++  +   +P  +Q ++   + DIAAGK+ P+ 
Sbjct: 267 YLRAAKGVAEGTWKAEARWDGLAAGVVKMAPYNEAIPADIQAKLKQLEADIAAGKIHPY- 325

Query: 322 AVAADVRDNEGHVVIAKGAQLSDEQILKMNWLVEGVQGRV 361
             A +++D +G+V +A G+ LSD  I  MNW V G+ G++
Sbjct: 326 --AGELKDQDGNVKVAAGSVLSDTDIRGMNWFVRGMIGKL 363



 Score = 23.9 bits (50), Expect = 0.007
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 215 VAFHTGSTAVMSAAQERGKLAIAYHSDMRKI 245
           VA  TGS A  + A+E  K+ + Y S + +I
Sbjct: 18  VALGTGSLASFAGAEEPLKIGVVYVSPIAEI 48