Pairwise Alignments

Query, 363 a.a., ABC transporter, substrate-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) from Variovorax sp. SCN45

Subject, 326 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  107 bits (268), Expect = 3e-28
 Identities = 86/313 (27%), Positives = 139/313 (44%), Gaps = 10/313 (3%)

Query: 9   AVLVWAAACFLSPAFSQPQVPLKIGFVYVTPVTDAGWVRQHEEGRKAVEAALGDKVKTTY 68
           + +  AA     PAF++   P K+G +    V++ GW R      K VEA LG +V  +Y
Sbjct: 10  SAVAMAALIAAGPAFAEGS-PFKMGLLVPGSVSEEGWNRIGFNALKGVEAELGAEV--SY 66

Query: 69  VENVSEGADAERVIRDLAQQGNRLIFTPSFGYMEPTLKVAKDFPDVKFESITGYKTAPNV 128
           VE     A  E+  RD A QG  +I    F + +  L+VA ++PD  F   + Y    NV
Sbjct: 67  VELQQNPASFEKAFRDFASQGYNVILGHGFEFQDAALEVAPEYPDTVFLISSSYIFEGNV 126

Query: 129 ATANARYYEGRYLAGIAAGRMTKTNVAGYVAGFPIPEVLQGINAFTLGMRSVNPNAKVHV 188
              N    +  YL G+ A +  K   AG V G  IP + +    FT G+RSV P+  V  
Sbjct: 127 IGLNTDTSQPFYLMGVIAAKTGKK--AGLVGGMEIPPIKEAFEGFTNGVRSVAPDFPVSE 184

Query: 189 VWLNEWFDPPKERDAAMALFNQNADVVAFHTGSTAV--MSAAQERGK--LAIAYHSDMRK 244
           V++  + D    ++A+++L +Q AD V  +     V    AA E G      +  SD   
Sbjct: 185 VYIGNFTDATATKEASLSLISQGADFVLPNASGATVGGFQAAAESGADVKTFSIFSDYTS 244

Query: 245 IAPDAQIVAVTHQWGGYYTQRAKAVLDGTWKSGNLWGGVKEGMIRVGDFGSKVPKTVQDE 304
           +AP   +      +     +    + +G   + N+  G+K+  +    +  +    V ++
Sbjct: 245 VAPKNILGLYVADYARGVIRIVGDIRNGKKPTTNVEFGLKDADVMKFTYNDQAANPVTED 304

Query: 305 VLARQKDIAAGKL 317
           V  +  D   GK+
Sbjct: 305 V-RKYVDEVKGKI 316