Pairwise Alignments

Query, 315 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 334 a.a., transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

 Score =  121 bits (304), Expect = 2e-32
 Identities = 81/298 (27%), Positives = 147/298 (49%), Gaps = 6/298 (2%)

Query: 1   MKRIGVLVFPGFQILDLA-AIAAFELANMHLDQPVYCVEMLSETGGPVVSSSGVT--VDS 57
           ++R   ++   F +L  A A+    +AN  + + VY   +L+E G  V  S+G +  VD 
Sbjct: 17  IRRYAFVLLDSFSMLSFASALECLRIANRMMGREVYTWTLLAEGGRTVSCSAGTSFQVDD 76

Query: 58  KRYTAAKFDTLVMTGSLTITP-TSEKLCQILRSGRRSARRVASICTGAFGLADAGLLDGR 116
                 + DT+++   +++   T++KL   LR   R   ++  +CT ++ LA AGLLDG+
Sbjct: 77  DLVELQRDDTILLCSGISVQDATTKKLLSWLRREARKGLKIGGLCTASYSLARAGLLDGK 136

Query: 117 RVTTHWAFAQELQRCHPLAKVQPDRIFINDDSLWTSAGMTAGIDLVLALVEEDLGVDMAR 176
           R T HW  A          ++    +F+ D +  ++AG T+ IDL+L L+  D G D+A 
Sbjct: 137 RATIHWENADSFNEEFDEVELTKS-VFVIDGNRMSTAGGTSSIDLMLKLIASDHGEDIAN 195

Query: 177 LIAKKLVVYHRRAGGQSQ-FSALLELEPKSDRIQLALAYARAHLREGLSVEELAEVAHLS 235
            +A +L+    R    +Q  S    +  +  ++ + +    A++ E +S   LA+   +S
Sbjct: 196 SVADQLIYSSIRTDQDTQRLSIPTRIGVRHPKLSMVIQMMEANIEEPISPSILAQNVGMS 255

Query: 236 PRQFSRAFKAETGQSPAQAVESLRVEAARALIDEGRLALGVVAQEVGFGDPERMRRAF 293
            RQ  R F+    +SP +    LR++ AR L+ +  +++  VA   GF  P    + +
Sbjct: 256 TRQLERLFRRYLNRSPKRYYMELRLQKARNLLMQTDMSVINVALACGFASPSHFSKCY 313