Pairwise Alignments

Query, 736 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 948 a.a., PKD domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  335 bits (858), Expect = 8e-96
 Identities = 224/581 (38%), Positives = 311/581 (53%), Gaps = 65/581 (11%)

Query: 8   ERYEGMLVEISQPLAVTETYQLGQYGQLVLALN----GRQFNATNGNSTSTNAQNMLSRI 63
           E +EGM V  SQ L V E Y LG+YG++ L  +    G Q  A   ++ +  A N+   I
Sbjct: 326 EPFEGMRVRFSQDLVVNEVYNLGRYGEISLGSSRHFIGTQVAAPGTDALAVTAANLKDSI 385

Query: 64  VIDDGSSRSNPNPI----PYLSAAGTDGTRRIGDTTQKVTGILSHSFGAYRIQPTVAPVF 119
           ++DDG +  NP+P+    P LSA+ T    R+GD    +TG++ + F  YRI PT    F
Sbjct: 386 LLDDGLTAQNPDPVIFPAPGLSASNTV---RVGDKATSLTGVMHYGFNLYRIMPTEPVNF 442

Query: 120 AQSNPRQPTAPVV--GGSLKVASLNVLNYFTTFVDGKNAAGQTGQVCLLGTGFPDTCRGA 177
              NPR P +PV+  GG+LKVAS NVLNYF       N  GQ       G+GFP T RGA
Sbjct: 443 VAENPR-PQSPVLAEGGNLKVASFNVLNYF-------NGDGQ-------GSGFP-TARGA 486

Query: 178 DNLTEFERQQAKIVAAIAGLDADVIGLMEIQN----TDIATKDLLAALNAKVGANTYAAV 233
           + L+EFERQ+AKIV+A+ G  ADV GLMEI+N     + A  DL+A LNA VG N YA V
Sbjct: 487 NTLSEFERQKAKIVSAMVGTSADVFGLMEIENDGFGANSAIADLVAGLNAAVGENRYAYV 546

Query: 234 -------NSGVFGTDLIKVDILYKPAKVQRVGGVVLPTGAD--LTD-----YIAASGRPP 279
                  N    GTD I V ++Y+  KV   G   + + A+  L D     +  +  RP 
Sbjct: 547 IPKVNGSNLSAIGTDAITVGLIYRSDKVSPQGDARILSSANSPLDDAGQPLFDDSKNRPM 606

Query: 280 LAQRFSAVGNNGGFWFVVNHLKSKGS-CLTTGDIDQGQGCWNLARTKQATALNSFVSKLK 338
           L Q F   G+       VNHLKSKGS C    D++ GQG  N+ RT+ ATA   ++++  
Sbjct: 607 LTQAFVLNGSEESVVVAVNHLKSKGSECAGDPDMNDGQGNCNITRTRAATAAGQWIAE-- 664

Query: 339 AMGESDVLMMGDFNSYLLEDPTKVLESAGNESLLKRMPAGDRYTYVFGGETGALDHAYAS 398
              E  VL++GD NSY  EDP   L +AG   L  ++   + Y+YVF GE+G LDHA A+
Sbjct: 665 QYPEQGVLLIGDLNSYAKEDPLSALANAGFSELFAKLEKANPYSYVFSGESGQLDHALAN 724

Query: 399 ASLATQVSGVSVWHINSDEPPVLDYN----TGSKPDDRYAPTPFRASDHDPVLVGLNLVA 454
            +L  +V  V+ WHIN+DEP VLDYN    T ++  D YA   +R+SDHDPV++ L L A
Sbjct: 725 TALVDKVVDVTEWHINTDEPRVLDYNEEFKTAAQVQDLYASDAYRSSDHDPVVISLLLEA 784

Query: 455 DAAVSQPIVNATIPGSVKTGETYGIDISEAIPGGSATLTALSVDWGDGTAANPAPGTGIV 514
           +    +      + G+        + ++         + +   D+GD + A        V
Sbjct: 785 ENVAPEASFTQLVNGA-------SVQLTSTSIDSDGQIVSTEWDFGDNSQAMGES----V 833

Query: 515 THTYATAGTFNVVVTLIDSAGQTGTKLGGVNVSTAVVLLPP 555
           +HTYA  G + V +T+ D+ G + +    V+V    V  PP
Sbjct: 834 SHTYAQTGDYLVTLTVTDNDGLSHSSSQMVSVVVENVKKPP 874



 Score =  103 bits (257), Expect = 4e-26
 Identities = 60/144 (41%), Positives = 81/144 (56%), Gaps = 9/144 (6%)

Query: 559 DLFFSEYVEGKTGSNKAIELYNPTSSALDLSLYTIKLYANGAKTSTNSLKLSGSLAGKGV 618
           +L  +EYVEG + +NKAIELYNPT+S++DLS Y ++ Y NG+ T   ++ L+G+LA    
Sbjct: 24  NLIITEYVEGSS-NNKAIELYNPTASSIDLSQYQLRFYFNGSTTVGTTIALTGTLAAGAT 82

Query: 619 LVVVHPSADPALKIAGSIMSNVVNFNGNDALTLEKSGVVIDRFGQVGTDPGTAWLGQPVS 678
            VV    A   +    +  S+   FNG+DA+ L     VID  GQVG DPG+ W      
Sbjct: 83  HVVADNDASADILAVTNQQSSASFFNGDDAIVLTYQDQVIDSLGQVGVDPGSEW------ 136

Query: 679 VAGEERVSTLDQTLRRKSEVTAGD 702
             G   +ST D TLRR  E    D
Sbjct: 137 --GSGDLSTQDNTLRRNPEQLIAD 158