Pairwise Alignments

Query, 736 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 870 a.a., endonuclease/exonuclease/phosphatase (RefSeq) from Shewanella sp. ANA-3

 Score =  166 bits (420), Expect = 5e-45
 Identities = 162/547 (29%), Positives = 239/547 (43%), Gaps = 115/547 (21%)

Query: 6   ALERYEGMLVEIS--QPLAVTETYQL---GQYGQLVLALNG------RQFNATNGNSTST 54
           ALERYEGM V++     L ++ T+     G+   ++++         + + A +  +T+ 
Sbjct: 319 ALERYEGMNVKLDAGSDLKISRTFSYDYAGRRNNMLVSYKAPLMKPTQLYPALSPEATAL 378

Query: 55  NAQNMLSRIVIDDGSSRSNPNPIPYLSAAGTD-GTRRIGDTTQKVTGILSHSFGAYRIQP 113
              N+ +++ I+     ++   IPY      + G  R+GD    + G++ +S+GAYR+  
Sbjct: 379 VKSNLENQLFIESDYKPAD-GVIPYFPDFNVETGYIRVGDQLTNLEGVIGYSYGAYRLVA 437

Query: 114 T---VAPVFAQSNPRQPTAPVVG-GSLKVASLNVLNYFTTFVDGK-NAAGQTGQVCLLGT 168
           T    A  F + + R     V   G ++VAS NVLN+F   V G  N +G          
Sbjct: 438 TNTITAGDFIRGDDRTDAPSVATKGDIRVASFNVLNFFNDVVGGDTNPSGSN-------- 489

Query: 169 GFPDTCRGADNLTEFERQQAKIVAAIAGLDADVIGLMEIQNTDI----ATKDLLAALNAK 224
                 RGA    E   Q+AKIV+AI  ++AD++GLMEI N       A K+L+ ALN K
Sbjct: 490 ------RGALTEEEMLLQRAKIVSAITAMNADIVGLMEIANNGFGEKSAIKNLVDALNEK 543

Query: 225 VGA-NTYAAV--------NSGVFGTDLIKVDILYKPAKVQRVGGVVLPTGADLTDYIAAS 275
             A N Y+ V        +   FG+D I V +LY+  KV   G        D  +  A +
Sbjct: 544 QTADNAYSFVEITDEDKYDGKYFGSDAITVGMLYRAGKVSLAGAA---RAIDTPEQHATA 600

Query: 276 G--------------------RPPLAQRFSAVGNNGGFWFVVNHLKSKGS-CLT------ 308
           G                    R  LAQ F     N     VVNHLKSKGS CL       
Sbjct: 601 GSVTRTKDGKTETNPGNDAYQRHSLAQTFKIHDEN--LTVVVNHLKSKGSGCLEDWVNFE 658

Query: 309 -TGDIDQGQGCWNLARTKQATALNSFVSKLKAMGESDVLMMGDFNSYLLEDPTKVL---- 363
            + D    QG  N  R   A  L   +  +K     D+L++GD N+Y +EDP +VL    
Sbjct: 659 ESVDPADQQGKCNAFRVSAAKVLGEALKDVKG----DLLVIGDMNAYGMEDPIRVLTDYD 714

Query: 364 ---------------------ESAGNE--------SLLKRMPAGDRYTYVFGGETGALDH 394
                                E  G++        +L  +      Y+Y + GE G LDH
Sbjct: 715 ASKSERDIMTASWTTLDGKVFERQGSKIEKGYGLINLNTKAHGAGTYSYSYNGELGNLDH 774

Query: 395 AYASASLATQVSGVSVWHINSDEPPVLDYNTGSKPDDRYAPTPFRASDHDPVLVGLNLVA 454
           A A+ SLA ++  +  WHINS E  + +Y      +   +   F ASDHDPV+V L+  A
Sbjct: 775 ALANTSLAKRLVDIEDWHINSVESNLFEYGKKFSGELAKSENAFSASDHDPVIVALSYPA 834

Query: 455 DAAVSQP 461
                +P
Sbjct: 835 PVEPPKP 841



 Score = 90.5 bits (223), Expect = 3e-22
 Identities = 68/192 (35%), Positives = 98/192 (51%), Gaps = 25/192 (13%)

Query: 540 KLGGVNVSTAVVLLPPGPPDLFFSEYVEGKTGSNKAIELYNPTSSALDLSLYTIKLYANG 599
           KL  ++++ A  L      D+  +EYVEG + +NKAIELYN   +A+DL+ Y +  Y +G
Sbjct: 6   KLTAISLAVAAALPMMASADVMITEYVEGSS-NNKAIELYNSGDTAIDLAGYKLVRYKDG 64

Query: 600 AKTSTNSLKLSG-SLAGKGVLVVVHPSADPALKIAGSIMSNVVNFNGNDALTLEKSGVVI 658
           A  + +   L G S+A K   V+++ SA   L       S  ++FNG DA+ L K G V+
Sbjct: 65  ATDALDMQALDGQSIAPKSTKVILNSSAVITLPQGVDSFSGSLSFNGGDAVALVKDGAVV 124

Query: 659 DRFGQVGTDPGTAWLGQPVSVAGEERVSTLDQTLRRKSEVTAGDPNPMAPFDPSVQWTNT 718
           D  G V T   T W               LD TL+RK +    +      F+P+ QW   
Sbjct: 125 DIIGDVPTP--TGW--------------GLDVTLQRKLDSLVAN----TVFNPA-QWEQ- 162

Query: 719 GIPADTFSGLGS 730
            +P DTF+GLGS
Sbjct: 163 -LPKDTFTGLGS 173