Pairwise Alignments

Query, 247 a.a., Transcriptional regulator, GntR family from Variovorax sp. SCN45

Subject, 236 a.a., histidine utilization repressor from Vibrio cholerae E7946 ATCC 55056

 Score = 53.9 bits (128), Expect = 3e-12
 Identities = 58/239 (24%), Positives = 99/239 (41%), Gaps = 12/239 (5%)

Query: 7   PHHSDISRHLTDAITSGHFALGSLLPTELELCNHYKTSRHTVRAALAELQRLGLVSRRKN 66
           P +  I + + D I SG + +G   PTELEL   +  SR TV  AL +L   G + RR  
Sbjct: 3   PRYLQIKQFMLDNIESGRWPVGYRTPTELELTEQFGVSRMTVNKALRDLVSEGKLQRRPR 62

Query: 67  VGTRVEAA--KPRDTFRPTLASVDDLVHFGTEHLRQVQSIEEVAVAGAVAEDLGCAPGAR 124
           +GT V AA  K            D+++  G ++  +V     ++   AVA  LG   G+ 
Sbjct: 63  LGTFVCAAEEKAESPLLDIRNIADEILSRGKQYHNKVVEQRALSADEAVAIKLGVMVGSP 122

Query: 125 WLRISSLRLDGGSESG-PIGWTDVYVDPAYSEIGEIVRESPETLISSLIGTRYDRQIAEI 183
                 +           + W +    P Y +  +  + +P   +S       +  ++ I
Sbjct: 123 VFYSEIIHYANDIPMQLEVRWVNSRSVPHYLD-QDFTQITPNQYLSQ------NCPLSAI 175

Query: 184 HQDVRACTVKDAAMAKALLVEQGAAALKIVRQYLDADGQAFEVSISVHPADRFSVSMRL 242
              V A  V DA + +AL +      L + R+    D +    ++  HP  R+ +S ++
Sbjct: 176 EHTVEA-IVADAHVKQALALAANEPCLLLNRRTWSGD-KLVSSALLYHPGSRYKLSSKI 232