Pairwise Alignments

Query, 380 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

Subject, 386 a.a., Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) from Phaeobacter inhibens DSM 17395

 Score =  245 bits (626), Expect = 1e-69
 Identities = 133/381 (34%), Positives = 222/381 (58%), Gaps = 2/381 (0%)

Query: 1   MTHFLTEDQISLRDTARRFAEGEVLPRAAAIDREDKFDRVLYRGMAELGLFGVSLPEAAG 60
           MT  L ED  +LRD   R+A+  V P A  ID++++F   L++ M ELGL G+++PE  G
Sbjct: 6   MTFDLGEDVNALRDMVHRWAQERVRPMAQEIDQKNEFPAELWQEMGELGLLGITVPEEFG 65

Query: 61  GSGFDTVSTCLVMEELARCSGAIGNAFAIPVEAALF-LHHHGNESQKA-LIPGILDGSIV 118
           G+G   ++  + +EE+AR S ++  ++       +  +  +GN  QKA  +P ++ G  V
Sbjct: 66  GAGMSYLAHTVAVEEIARASASVSLSYGAHSNLCVNQIKLNGNAEQKAKYLPRLVSGEHV 125

Query: 119 MATAMSEPDYGSDVASITTTARAVDDGWVLNGTKAWVTLGGVADRIMVFARTGKEAGHKS 178
            A AMSE   GSDV S++  A   +D + LNG K W+T G  AD ++V+A+T  +AG K 
Sbjct: 126 GALAMSEAGAGSDVVSMSLRAEKRNDHYRLNGNKYWITNGPDADTLVVYAKTDPDAGSKG 185

Query: 179 ISCFMVDAHQAGVSRGKNEELLGMHGLEDCQIVLQDVHVPRTALIGAENEAFKTAMGNFN 238
           ++ F+++    G S  ++ + LGM G    ++V +DV VP   ++G E +  +  M   +
Sbjct: 186 MTAFLIEKEFKGFSTSQHFDKLGMRGSNTAELVFEDVEVPFENVLGEEGKGVRVLMSGLD 245

Query: 239 FSRLLMSSMALGMAQAAMEDAVAYATTRKQFGQPIMNFQAIQFMVADMSTDIAAARLLIH 298
           + R++++ +  G+  A M++ + Y   RKQFGQPI NFQ +Q  +ADM T +  AR  ++
Sbjct: 246 YERVVLAGIGTGIMAACMDEMMPYMKERKQFGQPIGNFQLMQGKIADMYTAMNTARAYVY 305

Query: 299 HGARLQDAGRSIAKEGAQAKLFTTDMAMRHVSNALQIHGGNGYSRDYRIERIFRDVRLAQ 358
             A+  D G    ++ A   L+ +++AM     A+Q  GG GY  D  + RIFRD +L +
Sbjct: 306 EVAKACDKGTVTRQDAAACCLYASEVAMTQAHQAVQAFGGAGYLSDNPVGRIFRDAKLME 365

Query: 359 IYEGTNQIQRLIISRQVEKEL 379
           I  GT++I+R++I R++  ++
Sbjct: 366 IGAGTSEIRRMLIGRELMSQM 386