Pairwise Alignments

Query, 280 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 273 a.a., ABC transporter substrate-binding protein from Rahnella sp. WP5

 Score = 72.4 bits (176), Expect = 1e-17
 Identities = 69/250 (27%), Positives = 109/250 (43%), Gaps = 7/250 (2%)

Query: 16  LSGSVLAQTCTPKVSAEHLTAPGKLQMSTNPTLPPQQFVD-SKGELQGLNIELGRAVAKH 74
           ++  VL        SA  L    +++++  P  PP +F D + G L G++ +LG  + K 
Sbjct: 9   ITAGVLLNGAVSVASAAELKQKDEIKVAMMPNYPPLEFKDPATGNLTGMDYDLGMELGKR 68

Query: 75  LCLEPVFVRMDMPPMVPALQAGRFDVINTGLFWTEERSKLMFQVPYGQQSMSIYTVPNSK 134
           L  +  +  +    MV A+   R D+I +G+  T+ R  +   V Y       YT    K
Sbjct: 69  LNRKISWQEIGFEQMVNAVATHRVDMILSGMTDTKPRQDIATFVDYYNSGPQFYTTVAHK 128

Query: 135 LVVNKFEDLSGHVVGI-ETGTYAERKSRESNAAMVAKGMAPIDFRTFATASETTAALRAG 193
             +N   DL G  VG     T+    +  S A  V  G   I        ++    LR G
Sbjct: 129 -EINTMLDLCGKKVGTSRRTTFPAEIAAWSEANCVPAGKPAIVVIGAEGTADARTQLRQG 187

Query: 194 QLEAGINIDETA--IAFEERGIVKI--RASGLYGTDITLSFRDRAVAEAVAQALTDLKAD 249
           ++E  +   ET   I   E+   K   +A     T + +S  D+ + +AV  ALTD+ AD
Sbjct: 188 RIEGVVQGSETLPYIMNLEKDTYKPLGKAFAYQVTGMGISKDDQPLIDAVKGALTDMIAD 247

Query: 250 GTYDKLFDKF 259
           GTY K+  K+
Sbjct: 248 GTYLKILTKW 257