Pairwise Alignments

Query, 317 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 307 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  105 bits (262), Expect = 1e-27
 Identities = 90/287 (31%), Positives = 132/287 (45%), Gaps = 29/287 (10%)

Query: 3   QVMFDLDVLRSFSTGIALGSYARAAEKLGRSTSAVSAQLKKLEAQAGTVLFRKAGRGLEL 62
           Q + D  +LR+F      GS+ RAA     + S VS QLK+LE Q G  L  + GR    
Sbjct: 15  QALLDPVLLRAFVAVADSGSFTRAAAATHLTQSTVSQQLKRLEQQLGCELLSRKGRYAMP 74

Query: 63  TDAGETLLAYAHRMLELNDEASAAMRGVDLQGAVRLGLQEDFGETLLPAVLGRFARAHPK 122
           T  GE LL YA ++L L  EA        L   +RL + EDF  T L  +L +     P 
Sbjct: 75  TADGERLLGYARQILALMAEAGMTPAQPPL---LRLAVAEDFAGTALMPILKKLITRFPS 131

Query: 123 VRIEACVARSADLRERLELGQLDLALAWDAGDQPLSPYAERVARLPLLWIGPKSPDRIDA 182
           V++E     S  L +  + G ++LAL             +R    P     P++   + A
Sbjct: 132 VKLEVQSGLSKPLYQAFQEGVVELAL-----------IKQRQGEHPAKACWPEALSWLAA 180

Query: 183 AWWTERERRGPGVRKSREPLPLIMLDAPCPLREIVIAALDRAGVPWRRSFASASLSALWA 242
           A W           K+ EP+PLI   A    R  +   LD AG+PWR  ++S SL  +  
Sbjct: 181 ADWQ--------AVKAGEPVPLIAFPAGGLYRNEMAQLLDEAGIPWRLVYSSNSLEGVLC 232

Query: 243 AASAGLGLTVRTPFGLPSH-VRTID-RSLLSLPALPQISLVLYRAQA 287
           A +AG+G+++     LPS  +R  + R + +LP    + L L+ A +
Sbjct: 233 AVAAGMGVSL-----LPSRFIRAREHREITALPRATAMELALHLASS 274