Pairwise Alignments

Query, 223 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  130 bits (328), Expect = 2e-35
 Identities = 80/218 (36%), Positives = 126/218 (57%), Gaps = 7/218 (3%)

Query: 7   FQNAQDFLPILLQGAVVTVQVTVLAFLLSSALGLALALMKLSPVRALSWAGSVIVNVIRG 66
           F    + LPILL+    T+++     + +  L L LA +++  V  L     + ++  RG
Sbjct: 5   FHYMLELLPILLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFFRG 64

Query: 67  LPIIVQLFYIYFVLPEFG---VQLTAFQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREA 123
            P++VQLF +Y+ LP+     V L AF A VIGL + ++AY AE+ RA I  +D  Q EA
Sbjct: 65  TPLLVQLFLLYYGLPQVFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEA 124

Query: 124 AQAMGMRSALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQLIASS 183
           + ++GM ++  MRR+ILPQA R+ALP   N  + M+K +SL  T+ VAE+    Q+ ASS
Sbjct: 125 SLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASS 184

Query: 184 TFQNMTVYTLVALLYLLMSLPLV----YGLRRLEKRFA 217
           +F+    +  VAL+Y ++ L L     +  ++L K +A
Sbjct: 185 SFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKLNKAYA 222