Pairwise Alignments

Query, 391 a.a., Nucleoside ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 326 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  122 bits (305), Expect = 2e-32
 Identities = 92/314 (29%), Positives = 144/314 (45%), Gaps = 12/314 (3%)

Query: 37  AAPAAPAPVAAAPAPATAAPLNIAFAYVGPVGDGGWSFAHDNARKALEKEFGDKIKTTFV 96
           +A A  A +AA PA A  +P  +     G V + GW+    NA K +E E G ++  ++V
Sbjct: 10  SAVAMAALIAAGPAFAEGSPFKMGLLVPGSVSEEGWNRIGFNALKGVEAELGAEV--SYV 67

Query: 97  ESVPEGADAERVFRDFVSQGNKLIFGTTFGYMEPMLKVAADNKDVKFEHATGYKTSENMR 156
           E     A  E+ FRDF SQG  +I G  F + +  L+VA +  D  F  ++ Y    N+ 
Sbjct: 68  ELQQNPASFEKAFRDFASQGYNVILGHGFEFQDAALEVAPEYPDTVFLISSSYIFEGNVI 127

Query: 157 TYDSRTYEGAYMAGVIAGAMTKSNTLGVVGSVPIPEVLRNINSFTLGAQSVNPKITTKVV 216
             ++ T +  Y+ GVIA    K    G+VG + IP +      FT G +SV P      V
Sbjct: 128 GLNTDTSQPFYLMGVIAAKTGKK--AGLVGGMEIPPIKEAFEGFTNGVRSVAPDFPVSEV 185

Query: 217 WVNEWFSPPKETEAATALINGGADVLFQNTDSPAV--LKTAQEKGK--RAFGWDSDMTAY 272
           ++  +       EA+ +LI+ GAD +  N     V   + A E G   + F   SD T+ 
Sbjct: 186 YIGNFTDATATKEASLSLISQGADFVLPNASGATVGGFQAAAESGADVKTFSIFSDYTSV 245

Query: 273 GPKAHLASAVINWTPYYVKATQEALDGKWTTGQAWWGVKEGAIDLVS----IAEDVPAEA 328
            PK  L   V ++    ++   +  +GK  T    +G+K+  +   +     A  V  + 
Sbjct: 246 APKNILGLYVADYARGVIRIVGDIRNGKKPTTNVEFGLKDADVMKFTYNDQAANPVTEDV 305

Query: 329 KAKVDEVKKGLKDG 342
           +  VDEVK  +  G
Sbjct: 306 RKYVDEVKGKIAAG 319