Pairwise Alignments

Query, 306 a.a., Nucleoside ABC transporter, permease protein 2 from Variovorax sp. SCN45

Subject, 310 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  174 bits (442), Expect = 2e-48
 Identities = 111/309 (35%), Positives = 167/309 (54%), Gaps = 15/309 (4%)

Query: 1   MESYALL--LGSTLSAGTVLA----IAALGLLINEKAGIVNLGAEGIMLCAAIAGFATVV 54
           ME  A L  L +T++A   LA     A++G + +E+AG++N+G EG+ML  A AGFA   
Sbjct: 1   MEDVASLSFLAATIAASWRLAAPLMFASIGEVFSERAGVLNIGLEGVMLAGAFAGFAAAF 60

Query: 55  TTHNPWLGFLAGMAAGALLAAFFGVLVIWLNTNQYATGLALSLFGVGFSAF---AGINFV 111
           T+ +  LG  A +AAG L+   F    I +  +Q   G A++L G+G +AF   A  +  
Sbjct: 61  TSGSILLGVAAAVAAGVLVGLLFAFFTITIKADQIVVGAAINLLGLGLTAFLFRAYFSSA 120

Query: 112 QAKLPESASYAIPVLGDIPLIGPALFRHHPMVYVAMALTAALIWFLYRTRAGLVLRSVGE 171
              +  +    +P L D+P  G A FR +  VY  + + A  ++ LYRT  GL LR+VGE
Sbjct: 121 GKGIEIAKPVDLPWLSDLPFFGEAFFRQNAFVYSTLPVAALAVFVLYRTSFGLTLRAVGE 180

Query: 172 SPESAHALGYPVRRIRFLAVIAGGALCGLAGAYLSTVYTPLWVEGMVAGRGWIALALTTF 231
            P++    G  V   R+ AV+   AL  L GA+L+  ++  +VEG+ +GRG+IALA+  F
Sbjct: 181 HPKAVDVSGRSVALYRYGAVLICSALAALGGAFLTLAHSNQFVEGISSGRGFIALAVVVF 240

Query: 232 ATWRPVRVLLGAYLFGGVSMLGFHLQSSGV-DVPPQFLSMLQYIAPIVVLALISRNPAFI 290
           A W P+   + + LFG    L   LQ+  V  +P Q    L Y+  I  L L+ RN    
Sbjct: 241 ARWSPIGAFIVSLLFGVFYALQLQLQAQPVLFLPYQLFQALPYVMTIAALILV-RN---- 295

Query: 291 RANMPASIG 299
           R + P+ +G
Sbjct: 296 RVDTPSMLG 304