Pairwise Alignments

Query, 383 a.a., Nucleoside ABC transporter, permease protein 1 from Variovorax sp. SCN45

Subject, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 82/300 (27%), Positives = 131/300 (43%), Gaps = 26/300 (8%)

Query: 66  ATPLLIIALGLAVCFRSNVWNIGAEGQFVFGAIAAGGVALL--ADKTTGQWIVVAILAAG 123
           ATPL++  LG  +C RS V N+G EG   FGA+  G +A+   AD  TG  I+VA L+ G
Sbjct: 21  ATPLILGTLGALLCERSGVLNLGIEGIMTFGAM-IGWLAVYNGADLWTG--ILVAGLSGG 77

Query: 124 ILGGMVWAGIVAFLRDKCNANEILVSLML----VYVATLLLGYMVFGPWKDP-NGYNFPQ 178
           I  G++ AG+   L    + + + V+L       YV  LL+      P  +P    + P 
Sbjct: 78  IF-GLLHAGLTVTLGLSQHVSGLGVTLFASSFSYYVFRLLVPVAGTPPTIEPFQPIDVPA 136

Query: 179 TKTFEAVTQIPRLFKGSRVS-IGLVIALVGAGALWVFLFRTRAGFAQQVGGLAPAASRYA 237
             +   +   P LF  +  + + +++ALV    L   LFRT  G A ++ G  P A+   
Sbjct: 137 LSSLPFLG--PALFTQTPPTYVAILLALV----LGYVLFRTPLGLAIRMTGENPHAAEAQ 190

Query: 238 GFSARRAVWIALLTSGGAAGLAGALEVAGPLGQLTPYVPAGYGFAAIIVAFVGRLHPVGM 297
           G +     + +++      G+ GA           P +  G G+  I +       P   
Sbjct: 191 GINPMAIRFGSVIVGSALMGIGGAFLTLSAFNSFFPTMVQGRGWICIALVVFASWRPGRA 250

Query: 298 IFSAILMSMFYIGGELAQSRLGLPKSLTGV--FQGLLLFTLLACDTLIAYRIRRKAAAKA 355
           +  A+L ++F         +L L   L+GV  +Q  L+   L     +A   RR    +A
Sbjct: 251 LVGALLFALF------DGFQLRLQTRLSGVVPYQIFLMIPYLLSIAALALMARRARVPQA 304