Pairwise Alignments

Query, 383 a.a., Nucleoside ABC transporter, permease protein 1 from Variovorax sp. SCN45

Subject, 349 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  199 bits (505), Expect = 1e-55
 Identities = 117/349 (33%), Positives = 188/349 (53%), Gaps = 1/349 (0%)

Query: 2   LKLEPRPELSRFWSYASPILALLITVLIGVALFAALGKDPVKGLLVFFYEPIKNGYAIGE 61
           ++ E R   S     A+P+LA+L  + +   L A  G   ++           +  +  E
Sbjct: 1   MRFERREHRSFALVIATPVLAILCALALAGLLIAIAGAPVMEAYWRILVGAFGSRLSATE 60

Query: 62  LMVKATPLLIIALGLAVCFRSNVWNIGAEGQFVFGAIA-AGGVALLADKTTGQWIVVAIL 120
            + +A+PL++  L  AV FR+ +WNIGAEGQF  GAIA A   + L         V  +L
Sbjct: 61  TLTRASPLILTGLAAAVAFRAKLWNIGAEGQFYLGAIAVAAASSHLFGGLPPPLQVPLLL 120

Query: 121 AAGILGGMVWAGIVAFLRDKCNANEILVSLMLVYVATLLLGYMVFGPWKDPNGYNFPQTK 180
            AG   G+V   +  +LR + + +E++ +L+L +VA L +  ++ GP KDP G+ +PQ++
Sbjct: 121 VAGAAAGIVLLLVPLWLRLRFSVDEVVTTLLLNFVAVLFVSMLIDGPLKDPMGFGWPQSQ 180

Query: 181 TFEAVTQIPRLFKGSRVSIGLVIALVGAGALWVFLFRTRAGFAQQVGGLAPAASRYAGFS 240
                  +P+LF  SR+ +GL+IALV A A+ +   RT  G   +  GL PA + +AG  
Sbjct: 181 PVADAAVLPKLFARSRLHVGLMIALVFAVAVHLVQSRTVFGMQSRAAGLNPAGAVFAGVP 240

Query: 241 ARRAVWIALLTSGGAAGLAGALEVAGPLGQLTPYVPAGYGFAAIIVAFVGRLHPVGMIFS 300
             R +      SGG AGLAGA+EV G  G +T  +  GYG++ I+VA +  LHP+G++ +
Sbjct: 241 LGRTLVTVACISGGLAGLAGAIEVMGVQGYVTTDLSPGYGYSGIVVAMLANLHPLGVVLA 300

Query: 301 AILMSMFYIGGELAQSRLGLPKSLTGVFQGLLLFTLLACDTLIAYRIRR 349
           A+  ++ ++G +     +G+P  +  V   L L ++L       YRIRR
Sbjct: 301 ALFTAVMFVGADGMSRSMGIPSYIADVTVALSLISMLTGVFFTQYRIRR 349