Pairwise Alignments

Query, 383 a.a., Nucleoside ABC transporter, permease protein 1 from Variovorax sp. SCN45

Subject, 354 a.a., branched-chain amino acid ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  206 bits (525), Expect = 6e-58
 Identities = 123/344 (35%), Positives = 182/344 (52%), Gaps = 2/344 (0%)

Query: 7   RPELSRFWSYASPILALLITVLIGVALFAALGKDPVKGLLVFFYEPIKNGYAIGELMVKA 66
           R E   + S+   +LAL  ++ +   L A  GK   +G+L+ +     +  A+ + ++K+
Sbjct: 9   RQEPLEWGSFFIFLLALAFSLSVSGLLLAIQGKPFAEGILILWRGGFGSFVALEDTLLKS 68

Query: 67  TPLLIIALGLAVCFRSNVWNIGAEGQFVFGAIAAGGVALLADKTTGQWIVVAILAAGILG 126
            P+ + +LG+AV FR  VWNIGAEGQF  GA+ A    +      G  ++  +       
Sbjct: 69  IPIFLCSLGVAVAFRMQVWNIGAEGQFALGAVGATWAVMTFGGLPGWLLMPVMFLCAAFA 128

Query: 127 GMVWAGIVAFLRDKCNANEILVSLMLVYVATLLLGYMVFGPWKDPNGYNFPQTKTFEAVT 186
           G  W  I A LR +   NEI+ +LM  Y+  LLL Y+VFG WKDP  + FP T  F    
Sbjct: 129 GAAWGLIPAVLRLRFGLNEIISTLMFNYIGILLLQYLVFGSWKDPTSFGFPMTPIFPDGA 188

Query: 187 QIPRLFKGSRVSIGLVIALVGAGALWVFLFRTRAGFAQQVGGLAPAASRYAGFSARRAVW 246
            I RLF   R+  GLV+ +  A  L VFL RTR GF    GG  P A+RYA       V 
Sbjct: 189 IIGRLF--GRIHWGLVVCVGVAVLLGVFLRRTRLGFELLAGGENPRAARYARMPYDFLVL 246

Query: 247 IALLTSGGAAGLAGALEVAGPLGQLTPYVPAGYGFAAIIVAFVGRLHPVGMIFSAILMSM 306
           + +   G  AG AG +E +  L +L P +  GYG+ AI+VA++ RL    + F A L++ 
Sbjct: 247 LVMGLCGALAGWAGCIETSATLNRLQPSIMVGYGYTAIVVAWLSRLRISSIAFFAFLLAG 306

Query: 307 FYIGGELAQSRLGLPKSLTGVFQGLLLFTLLACDTLIAYRIRRK 350
             +G E  Q  L +P +  G+ +GL+L ++LA     +Y +RR+
Sbjct: 307 LRVGVENLQLDLQVPAAFGGIIEGLILLSVLAGQFFDSYALRRR 350