Pairwise Alignments

Query, 504 a.a., Nucleoside ABC transporter, ATP-binding protein from Variovorax sp. SCN45

Subject, 517 a.a., ABC transporter ATP-binding protein from Pseudomonas fluorescens FW300-N2E2

 Score =  487 bits (1254), Expect = e-142
 Identities = 268/496 (54%), Positives = 334/496 (67%), Gaps = 5/496 (1%)

Query: 5   RLQLAHITKRYPAVVANSDISLAVQPGEIHAVLGENGAGKSTLMKIIYGSVKPDEGTVTF 64
           RLQL +I+KRYP  +AN  I L++QPGEIHA+LGENGAGKSTLMKIIYG    D G V +
Sbjct: 9   RLQLRNISKRYPGCLANDAIDLSIQPGEIHALLGENGAGKSTLMKIIYGVTPADSGEVIW 68

Query: 65  DGQAVNLRNPQQARALGISMVFQHFSLFDTLTVAENVWLGLDKSLQL-AEVARSITAKAS 123
            GQ VNLRNP QAR+LGI MVFQHFSLF+TLTVA+N+ L +  +    A++   I   + 
Sbjct: 69  QGQRVNLRNPAQARSLGIGMVFQHFSLFETLTVAQNIALAMGAAAGTPAQLEPRIREVSR 128

Query: 124 EYGLDIDPSRPVHTLSVGEMQRVEIIRALLTNPKLLILDEPTSVLTPQAVLKLFQVLKKL 183
            YG+ ++P R VH+LS+GE QRVEIIR L+ + +LLILDEPTSVLTP    +LF  L++L
Sbjct: 129 RYGMALEPQRLVHSLSIGERQRVEIIRCLMQDIRLLILDEPTSVLTPVEAEELFVTLRRL 188

Query: 184 SSEGCSILYISHKLHEIRELCTGCTVLRGGKVTGVCNPQNESNESLSRLMIGSEPPPLKH 243
           +SEGCSIL+ISHKL E+R LC   TVLRGG+V+G C P + ++  L++LM+G     +  
Sbjct: 189 ASEGCSILFISHKLGEVRALCHSATVLRGGRVSGHCTPAHCTDRELAQLMVGEAAGLITD 248

Query: 244 RP-VHAGAVALRVERLSLAREDQFGVDLDGISFEVRAGEVVGVAGVSGNGQKELLYTLSG 302
            P V A    L++++LS    D FG  L  I  EVR+GE+VG+AGV+GNGQ E L  LSG
Sbjct: 249 YPKVSADKAFLQIDKLSWHNPDPFGCSLREIDLEVRSGEIVGIAGVAGNGQDEWLALLSG 308

Query: 303 ED--VRADAAMVRVFDKPAGRLRPRARRALGLHFVPEERLGRGAVPTLGLAHNLLLTR-G 359
           E    R     +R   +P   LRP ARR LGL FVP ERLG GAVP L LA N LL+   
Sbjct: 309 ETPLARQQGETIRFDGQPVAHLRPDARRRLGLAFVPAERLGHGAVPQLSLADNALLSAFQ 368

Query: 360 NAVGRGGWIRTGVLERHARSIIERFNVKAGGPHAAARSLSGGNLQKFIVGREIDANPRLF 419
             +   G IR   +E  A  II RF VK       ARSLSGGNLQKFI+GREI   P+L 
Sbjct: 369 QGLVNHGLIRRSKVEHLAEEIIRRFGVKTRDTKTPARSLSGGNLQKFILGREILQQPKLL 428

Query: 420 IVSQPTWGVDVGAAALIRGEILALRDAGCAVLVVSEELDELFEISDRLHVIAKGRLSPSI 479
           + + PTWGVDVGAAA I   ++ALRDAG A+LV+SE+LDELF+ISDRL  +  GRLS   
Sbjct: 429 VAAHPTWGVDVGAAATIHRALIALRDAGAAILVISEDLDELFQISDRLGALCGGRLSALR 488

Query: 480 DRAAATPAQIGEWMSG 495
                  + +G WM+G
Sbjct: 489 PTVETRLSDVGGWMAG 504