Pairwise Alignments

Query, 504 a.a., Nucleoside ABC transporter, ATP-binding protein from Variovorax sp. SCN45

Subject, 502 a.a., galactose/methyl galactoside import ATP-binding protein MglA from Vibrio cholerae E7946 ATCC 55056

 Score =  254 bits (648), Expect = 7e-72
 Identities = 162/498 (32%), Positives = 264/498 (53%), Gaps = 17/498 (3%)

Query: 6   LQLAHITKRYPAVVANSDISLAVQPGEIHAVLGENGAGKSTLMKIIYGSVKPDEGTVTFD 65
           L++  ++K +P V A   ++L V+P  +HA++GENGAGKSTL+K ++G  + DEG + F 
Sbjct: 10  LEMTGVSKEFPGVKALDKVNLKVRPHSVHALMGENGAGKSTLLKCLFGIYEKDEGDIIFL 69

Query: 66  GQAVNLRNPQQARALGISMVFQHFSLFDTLTVAENVWLGLDKS----LQLAEVARSITAK 121
           GQ VN  + ++A   G+SMV Q  +     +V +N+WLG   +    +   ++ R   A 
Sbjct: 70  GQHVNFSSSKEALESGVSMVHQELNQVKQCSVMDNIWLGRYPTKGFFVDHDKMYRDTKAI 129

Query: 122 ASEYGLDIDPSRPVHTLSVGEMQRVEIIRALLTNPKLLILDEPTSVLTPQAVLKLFQVLK 181
            +E  +DIDP   V TLSV +MQ +EI +A   + K++I+DEPTS LT + V  LF ++K
Sbjct: 130 FAELDIDIDPKVKVATLSVSQMQMLEIAKAFSYDAKVVIMDEPTSSLTEKEVNHLFTIIK 189

Query: 182 KLSSEGCSILYISHKLHEIRELCTGCTVLRGGKVTGVCNPQNESNESLSRLMIGSEP--- 238
           KL  +GC ++YISHK+ EI  +C   T+LR G+       +    + +  +M+G E    
Sbjct: 190 KLKEKGCGVVYISHKMEEIFSICDEITILRDGQWVDTRPLKGLDMDKIISMMVGRELTQR 249

Query: 239 -PPLKHRPVHAGAVALRVERLSLAREDQFGVDLDGISFEVRAGEVVGVAGVSGNGQKELL 297
            P   + P +   V L V+ L+   +      +  ISFE+RAGE++GVAG+ G+ + +++
Sbjct: 250 FPEKSNEPKN---VILEVKNLTALNQP----SIQDISFELRAGEILGVAGLVGSRRTDIV 302

Query: 298 YTLSGEDVRADAAMVRVFDKPAGRLRPRARRALGLHFVPEERLGRGAVPTLGLAHNLLLT 357
            T+ G   R+ A  + +  +             G   V EER   G    L +  N L+ 
Sbjct: 303 ETIFGVRERS-AGHILLHGREMKNHDAHEAIRNGFALVTEERRSTGIYSNLDITFNSLVA 361

Query: 358 RGNAVGRG-GWIRTGVLERHARSIIERFNVKAGGPHAAARSLSGGNLQKFIVGREIDANP 416
             +      G +    ++   + +I+   VK         SLSGGN QK I+GR +   P
Sbjct: 362 NVDEYKTPYGLLSDKKMKSDTQWVIDSMRVKTPSHQTHIGSLSGGNQQKVIIGRWLLTQP 421

Query: 417 RLFIVSQPTWGVDVGAAALIRGEILALRDAGCAVLVVSEELDELFEISDRLHVIAKGRLS 476
            + ++ +PT G+DVGA   I   IL L      ++++S E+ EL  I+DR+ V++ GR +
Sbjct: 422 EILMLDEPTRGIDVGAKYEIYQLILELAKKDKGIIIISSEMPELLGITDRIMVMSNGRNA 481

Query: 477 PSIDRAAATPAQIGEWMS 494
             ++    +  +I E  S
Sbjct: 482 GIVNTKQTSQNEILELAS 499