Pairwise Alignments

Query, 504 a.a., Nucleoside ABC transporter, ATP-binding protein from Variovorax sp. SCN45

Subject, 504 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  271 bits (692), Expect = 5e-77
 Identities = 173/497 (34%), Positives = 266/497 (53%), Gaps = 20/497 (4%)

Query: 1   MTTPRLQLAHITKRYPAVVANSDISLAVQPGEIHAVLGENGAGKSTLMKIIYGSVKPDEG 60
           M T    L  I+K +  + A   ++  V+PGE+HA+LGENGAGKSTLM+++ G + P +G
Sbjct: 1   MVTELANLKSISKSFGGIHALRSVNFDVRPGEVHALLGENGAGKSTLMRVLGGEIIPSQG 60

Query: 61  TVTFDGQAVNLRNPQQARALGISMVFQHFSLFDTLTVAENVWLG-LDKSLQLAEVARSIT 119
            V  +G+   LR+P+ ARALGI ++ Q  +L   L+VAEN++LG L   +    + R   
Sbjct: 61  EVVINGKRTELRDPRDARALGIVVIHQELALAPDLSVAENIFLGELPTLISRFSLRRRAK 120

Query: 120 AKASEYGLDIDPSRPVHTLSVGEMQRVEIIRALLTNPKLLILDEPTSVLTPQAVLKLFQV 179
                 G DIDP R V TLSV   Q VEI +AL  + K+++ DEPT+VL  Q  +KL Q+
Sbjct: 121 QLIDRLGFDIDPGRLVGTLSVAHQQVVEIAKALSQDIKIIVFDEPTAVLGAQDAMKLHQI 180

Query: 180 LKKLSSEGCSILYISHKLHEIRELCTGCTVLRGGKVTGVCNPQNESNESLSRLMIG---- 235
           ++ L   G  I+YISH+L E+ ++    TV++ G+  G     +   + + R+M+G    
Sbjct: 181 IRGLRDRGVGIVYISHRLDEVFDIADRMTVMKDGETVGTVATTDVKIDDIIRMMVGRPIA 240

Query: 236 SEPPPLKHRPVHAGAVALRVERLSLAREDQFGVDLDGISFEVRAGEVVGVAGVSGNGQKE 295
           +  P    R +  GA  L V++L+  R       +  +SF VRAGE+VG+ G+ G+G+ E
Sbjct: 241 NMFPERSQRTI--GAELLNVKKLNAGRM------VRDVSFSVRAGEIVGLGGLIGSGRTE 292

Query: 296 LLYTLSGEDVRADAAMVRVFDKPAGRLRPRARRALGLHFVPEERLGRGAVPTLGLAHNLL 355
           +   + G D   D+  + +  K      PR     G+  VPE+R   G V    +  N  
Sbjct: 293 VARAIFGAD-PLDSGTISLKGKALKLKSPRDAVKAGIGLVPEDRKEHGVVIDKPIRVNAT 351

Query: 356 LTR-GNAVGRGGWIRTGVLERHARSIIERFNVKAGGPHAAARSLSGGNLQKFIVGREIDA 414
           + R  + V   G+++  +      ++ +   +KA    A   SLSGGN QK ++ +   A
Sbjct: 352 MARMSSVVNALGFLKPALERTDVTALGKSLRLKASSIDAPVSSLSGGNQQKVVLAKWFHA 411

Query: 415 NPRLFIVSQPTWGVDVGAAALIRGEILALRDAGCAVLVVSEELDELFEISDRLHVIAKGR 474
              + I+ +PT GVDVGA A I   I  L + G AVLV+S E  ELF + DR+  + +G+
Sbjct: 412 GGDVIILDEPTRGVDVGAKAEIYALINKLAEDGKAVLVISSEHQELFGLCDRVLAMGQGQ 471

Query: 475 LSPSIDRAAATPAQIGE 491
           +     R   TP+   E
Sbjct: 472 I-----RGELTPSNYSE 483



 Score = 85.9 bits (211), Expect = 3e-21
 Identities = 62/224 (27%), Positives = 112/224 (50%), Gaps = 23/224 (10%)

Query: 23  DISLAVQPGEIHAVLGENGAGKSTLMKIIYGSVKPDEGTVTFDGQAVNLRNPQQARALGI 82
           D+S +V+ GEI  + G  G+G++ + + I+G+   D GT++  G+A+ L++P+ A   GI
Sbjct: 269 DVSFSVRAGEIVGLGGLIGSGRTEVARAIFGADPLDSGTISLKGKALKLKSPRDAVKAGI 328

Query: 83  SMV----FQHFSLFDT----------LTVAENVWLGLDKSLQLAEVA---RSITAKASEY 125
            +V     +H  + D           ++   N    L  +L+  +V    +S+  KAS  
Sbjct: 329 GLVPEDRKEHGVVIDKPIRVNATMARMSSVVNALGFLKPALERTDVTALGKSLRLKASSI 388

Query: 126 GLDIDPSRPVHTLSVGEMQRVEIIRALLTNPKLLILDEPTSVLTPQAVLKLFQVLKKLSS 185
                   PV +LS G  Q+V + +       ++ILDEPT  +   A  +++ ++ KL+ 
Sbjct: 389 ------DAPVSSLSGGNQQKVVLAKWFHAGGDVIILDEPTRGVDVGAKAEIYALINKLAE 442

Query: 186 EGCSILYISHKLHEIRELCTGCTVLRGGKVTGVCNPQNESNESL 229
           +G ++L IS +  E+  LC     +  G++ G   P N S E+L
Sbjct: 443 DGKAVLVISSEHQELFGLCDRVLAMGQGQIRGELTPSNYSEENL 486