Pairwise Alignments

Query, 504 a.a., Nucleoside ABC transporter, ATP-binding protein from Variovorax sp. SCN45

Subject, 503 a.a., ribose import ATP-binding protein RbsA from Phaeobacter inhibens DSM 17395

 Score =  262 bits (669), Expect = 2e-74
 Identities = 171/506 (33%), Positives = 263/506 (51%), Gaps = 25/506 (4%)

Query: 3   TPRLQLAHITKRYPAVVANSDISLAVQPGEIHAVLGENGAGKSTLMKIIYGSVKPDEGTV 62
           +P L+L  I K +P V A   +SL + PGE+HA++GENGAGKSTLMK++ G  +PDEG +
Sbjct: 5   SPVLRLEGIVKTFPGVRALDGVSLTILPGEVHALMGENGAGKSTLMKVLGGIHQPDEGQI 64

Query: 63  TFDGQAVNLRNPQQARALGISMVFQHFSLFDTLTVAENVWLG-LDKS----LQLAEVARS 117
               Q V +  P  A+A GI  + Q  SL D L+VAEN++LG L +     +  AE+   
Sbjct: 65  IVAEQPVVMSGPLDAKAKGIVFIHQELSLADELSVAENIYLGELPRKRFGLVDWAELEAK 124

Query: 118 ITAKASEYGLDIDPSRPVHTLSVGEMQRVEIIRALLTNPKLLILDEPTSVLTPQAVLKLF 177
             A   +  +  +    V  LS+   Q VEI RAL  + K +I DEPT+ LT    + LF
Sbjct: 125 TNAILEKLKVGFNAKTRVGDLSIANQQMVEIARALTVDAKAVIFDEPTASLTDAEKVVLF 184

Query: 178 QVLKKLSSEGCSILYISHKLHEIRELCTGCTVLRGGKVTGVCNPQNESNESLSRLMIGSE 237
           +V+  L  +G  I YISH++ EI ++    +VLR G+  G  N    + E+++++MIG +
Sbjct: 185 EVISDLQEQGVGIAYISHRMEEIFKITDRISVLRDGQYQGTVNTAETNEENVTQMMIGRK 244

Query: 238 PPPLKHRPVH-AGAVALRVERLSLAREDQFGVDLDGISFEVRAGEVVGVAGVSGNGQKEL 296
               ++   H  G VAL V  LS       G   + ++FEVR GEVVG  G+ G G+ E+
Sbjct: 245 LDLSRNEAHHELGEVALEVRGLSC------GSLFEDVNFEVRRGEVVGFYGLVGAGRTEI 298

Query: 297 LYTLSG------EDVRADAAMVRVFDKPAGRLRPRARRALGLHFVPEERLGRGAVPTLGL 350
             TL G        +  D A V +         P      G+  VPE+R G+G V  +  
Sbjct: 299 AETLFGLRNPTSGSIFLDGAEVAI-------TSPHDAIERGISLVPEDRKGQGLVLGMNC 351

Query: 351 AHNLLLTRGNAVGRGGWIRTGVLERHARSIIERFNVKAGGPHAAARSLSGGNLQKFIVGR 410
             N+ L + + +  G ++  G          ++ +++  G      +LSGGN QK ++G+
Sbjct: 352 RDNMTLPQVDDLKAGPFVADGAEIAIFDQYRDKLDIRTPGWKQLVGNLSGGNQQKIVIGK 411

Query: 411 EIDANPRLFIVSQPTWGVDVGAAALIRGEILALRDAGCAVLVVSEELDELFEISDRLHVI 470
            +   P + IV +PT G+DVG+ A I   +  L   G AV+V+S E+ E+  ++DR+  +
Sbjct: 412 WLSMRPNVLIVDEPTRGIDVGSKAEIHNLLRDLAAQGYAVIVISSEMPEVLHVADRIVAM 471

Query: 471 AKGRLSPSIDRAAATPAQIGEWMSGL 496
             GR+  +      T   +   +SGL
Sbjct: 472 YSGRIMRTFTSEEVTEENLIAAISGL 497