Pairwise Alignments

Query, 351 a.a., TRAP transporter solute receptor, unknown substrate 3 from Variovorax sp. SCN45

Subject, 334 a.a., TRAP-type periplasmic solute-binding protein from Sinorhizobium meliloti 1021

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 61/263 (23%), Positives = 111/263 (42%), Gaps = 11/263 (4%)

Query: 8   RRTALAPTAIAIAATAALALCAPATQAQDKPVQLKLSSWVPAQHPLNPALQAWADDIKKE 67
           R+  LA TAIA   +AA    APA  A+     +++S+ +   HP+   ++A    + ++
Sbjct: 2   RKLLLATTAIAFGLSAA----APAF-AEFNDRNIRVSNGINEDHPVGNGIKAMQACLDQK 56

Query: 68  SGGTITAILFPSEQLGKAFDHYDMARDGIADFSYVNPGYQPGRFPVMAGASLPFLFSNGK 127
           SGG +    F    LG         R G+ +    +     G  P +    LPFLF+N +
Sbjct: 57  SGGKLKLTAFWGGALGGDLQATQALRSGVQEAVVTSSSPLVGIIPALGVFDLPFLFANAQ 116

Query: 128 EGSAAIDAWYRNYAAKEMKDVKYCFAFVHDPGTFHSRKKIVVP----GDVKGLKVRPATS 183
           E    +D  + +   ++++          + G F +    V P     D +G+KVR   +
Sbjct: 117 EAYTVLDGDFGDMMNEKLEAAGLVNLAYWENG-FRNLSNSVRPVTKWEDFEGMKVRVMQN 175

Query: 184 TVG-QLITSLGGTNVQASAPESRDMLERGVADAITFPWGSIGLFGIDKVVKYHMDAPLYV 242
            +      +LG      +  E    LE    DA   P+ +I      +V KY  +     
Sbjct: 176 NIFLDTFQNLGANATPMAFGEVFSALETKAIDAQENPYVTIDTSKFFEVQKYVTETNHAY 235

Query: 243 TPFVWVMNKGKYDAMSTAQKKVI 265
           TPF+++ +K  +D+ +  ++  +
Sbjct: 236 TPFLFLFSKPIFDSYTPEEQAAL 258