Pairwise Alignments

Query, 351 a.a., TRAP transporter solute receptor, unknown substrate 3 from Variovorax sp. SCN45

Subject, 325 a.a., C4-dicarboxylate transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 50.8 bits (120), Expect = 5e-11
 Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 24/222 (10%)

Query: 15  TAIAIAATAALALCAPATQAQDKPVQLKLSSWVPAQHPLNPALQAWADDIKKESGGTITA 74
           T IA AA AAL+ C  A  AQ+  ++   S   P + P+  A++ +A+ + + SGG I  
Sbjct: 3   TLIAAAAMAALSFCGIAN-AQEYSLRFSTSQVNPNE-PIIKAMKTYAERVGERSGGRIAI 60

Query: 75  ILFPSEQLGKAFDHYDMARDGIADFSYVNPGYQPGRF-PVMAGASLPFLFSNGKEGSAAI 133
            +   +QLG      +M   G +  S  + G Q G+F P ++  + P+++ +     AA 
Sbjct: 61  TVMTGDQLGAQKKVNEMVMSGASLLSATDYG-QLGQFVPDLSILAGPYVYPD----LAAT 115

Query: 134 DA-----WYRNYAAK-EMKDVKY-----CFAFVHDPGTFHSRKKIVVPGDVKGLKVR-PA 181
           D       Y++ + K E + +K       F + H      + K +  P D+ G+ +R P+
Sbjct: 116 DRLFASDLYKDLSGKLEARGIKIIMPNGLFGYRH----IIANKPVRSPADLAGVTIRVPS 171

Query: 182 TSTVGQLITSLGGTNVQASAPESRDMLERGVADAITFPWGSI 223
           +  +     + G    +    +  + L+ GV DA   P+GSI
Sbjct: 172 SPIMMATFGNYGARPTELPWGDVYNALQTGVVDAAEGPFGSI 213