Pairwise Alignments

Query, 351 a.a., TRAP transporter solute receptor, unknown substrate 3 from Variovorax sp. SCN45

Subject, 331 a.a., TRAP-type large permease component from Sinorhizobium meliloti 1021

 Score = 57.8 bits (138), Expect = 4e-13
 Identities = 63/275 (22%), Positives = 102/275 (37%), Gaps = 34/275 (12%)

Query: 8   RRTALAPTAIAIAATAALALCAPATQAQDKPVQLKLSSWVPAQHPLNPALQAWADDIKKE 67
           RRT L      +AA AAL+L  P+     +   L+L    P  HP N A     + +K E
Sbjct: 5   RRTFLG----GVAAGAALSLATPSLVRAQETRTLRLGIVTPPGHPWNNAALKVGEALKAE 60

Query: 68  SGGTITAILFPSEQLGKAFDHYDMARDGIADFSYVNPGYQPGRFPVMAGASLPFLFSNGK 127
           + G ++  +FP+ QLG         + G  D  ++       R P +A  + P++     
Sbjct: 61  TNGRLSISVFPAGQLGNEAAMLQQMQSGALDLGWIMTAELGSRIPAVAAINAPWVV---- 116

Query: 128 EGSAAIDAWYRNYAAKEMKDVKYCFAFVHDPGT------------FHSRKKIVVPGDVKG 175
           + +A +    R   A ++ DV        + GT              S K+I    D+ G
Sbjct: 117 DSTAKVAKLVREPVAMKLLDV-----LPAETGTVGLAWGITTMRVVFSAKEIAGLDDING 171

Query: 176 LKVR-PATSTVGQLITSLGGTNVQASAPESRDMLERGVADA----ITFPWGSIGLFGIDK 230
           +K+R   T         LG        P   D +  G  D     + F W        DK
Sbjct: 172 MKLRINTTPAYRDFYQLLGAAPTPIPTPAVFDAMSNGQVDGLEADLDFSWNQ----RFDK 227

Query: 231 VVKYHMDAPLYVTPFVWVMNKGKYDAMSTAQKKVI 265
           V K  +       P V + +   +  +  A +++I
Sbjct: 228 VSKTMLKMNAIFMPCVALASGRVWQTLPEADREII 262