Pairwise Alignments

Query, 433 a.a., TRAP dicarboxylate transporter, DctM subunit, unknown substrate 3 from Variovorax sp. SCN45

Subject, 426 a.a., TRAP transporter, DctM subunit from Pseudomonas stutzeri RCH2

 Score =  292 bits (748), Expect = 1e-83
 Identities = 161/425 (37%), Positives = 248/425 (58%), Gaps = 8/425 (1%)

Query: 11  FVALFVLMLLRVPVGMAMGLVGVTGYSYLVGPGPALKLVGQTSMRTVTDYTFGVIPMFML 70
           F ALFVLM + VPV +++GL G    + ++    +++ +      T   YT   IP F+L
Sbjct: 7   FAALFVLMFIGVPVAVSLGLAG--SLTIMIFSQDSVRSLAIKLFETSEHYTLLAIPFFLL 64

Query: 71  MGALVSVSGVSRELFKAANSMIGHLRGGLGVATVVACGGFAAICGSSVATAATFSAVAYP 130
            GA ++  GV+R L   AN+ +GH+RGGL +  V+AC  FAA+ GSS AT A   ++A  
Sbjct: 65  AGAFMTTGGVARRLIDFANACVGHIRGGLAIGAVLACMLFAALSGSSPATVAAVGSIAIA 124

Query: 131 EMRRFNYPQSFSTGVIAAGGTLGAILPPSTVLAVYAILTQQDIGKLFMAGIVPGILAMAM 190
            M R  YPQ+F  G++   GTLG ++PPS V+ VYA  T+  +GKLFMAG+VPGIL    
Sbjct: 125 GMVRSGYPQAFGAGIVCNAGTLGILIPPSVVMVVYAAATETSVGKLFMAGVVPGILLGGA 184

Query: 191 YVMTIAII-VKLRPDWLPGGEIKPWSERVKDLKNVWAPLVLFVFVIGGLYGGFFTPTEAG 249
            ++ I II VK     LP    + W    +  K +W  L+L V ++GG+Y G FTPTEA 
Sbjct: 185 LMIAIYIIAVKKNLPALPRASFREWLSAAR--KAIWG-LLLMVIILGGIYSGMFTPTEAA 241

Query: 250 GVGA-SGAFILGLVRRKLDGPKIREALLSATRTAAAVFTVLIGALLFGYFLTITQSPQKL 308
            V A   AF+   V + +      + LL + + +  +  ++  A+LF + LT  Q PQ +
Sbjct: 242 AVAAVYSAFVALFVYKDISLRDCPKVLLESGKLSIMLMFIIANAMLFAHVLTTEQIPQAI 301

Query: 309 TEFLTGLGIGRYGVLALIMLMYLVLGCLMDAMAMIILTVPIIYPVIVHLGFDPIWFGVII 368
           T ++   G+  +  L ++ ++ L+ G  M+  A+I++  PI++P+ + LG DPI  G+I+
Sbjct: 302 TAWVIEAGLQPWMFLLVVNIVLLIAGAFMEPSAIILILAPILFPIAIQLGIDPIHLGIIM 361

Query: 369 VMTVELGLIHPPVGMNVFVIKSVVKDVSFTTIFKGVLPFIVTDIVRLVILIAFPIIALWL 428
           V+ +E+GLI PPVG+N+FV  S V  +  T + + VLP++   +  LVI+   P I+L L
Sbjct: 362 VVNMEIGLITPPVGLNLFV-ASAVTGMPVTQVIRAVLPWLALMLSFLVIITYVPSISLAL 420

Query: 429 PTRMG 433
           P  +G
Sbjct: 421 PNMLG 425