Pairwise Alignments

Query, 433 a.a., TRAP dicarboxylate transporter, DctM subunit, unknown substrate 3 from Variovorax sp. SCN45

Subject, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  256 bits (653), Expect = 1e-72
 Identities = 148/449 (32%), Positives = 242/449 (53%), Gaps = 30/449 (6%)

Query: 5   AVAVLGFVALFVLMLLRVPVGMAMGLVGVTGYSYLVGPGPA-LKLVGQTSMRTVTD-YTF 62
           AVA+L F+ +  +M++ VP+ +++GL  +    +L+    A L  V QT        YT 
Sbjct: 2   AVALL-FILVIGMMIVGVPIAISLGLSSIL---FLLWHSDASLASVAQTLFNAFAGHYTL 57

Query: 63  GVIPMFMLMGALVSVSGVSRELFKAANSMIGHLRGGLGVATVVACGGFAAICGSSVATAA 122
             IP F+L    +S  GV++ + + A +M+G  RGGL +A+VVAC  FAA+ GSS AT  
Sbjct: 58  LAIPFFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVV 117

Query: 123 TFSAVAYPEMRRFNYPQSFSTGVIAAGGTLGAILPPSTVLAVYAILTQQDIGKLFMAGIV 182
              ++    M +  Y + F+ GVI   GTLG ++PPS V+ VY+  T   +G++F+ G+V
Sbjct: 118 AIGSIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVV 177

Query: 183 PGILAMAMYVMTIAIIVKLRPDWLPGGEIKPWSERVKDLKNVWAPLVLFVFVIGGLYGGF 242
           PG+LA  M ++ I I  +++   LP      W E +K  K     L+L V ++GG+YGG 
Sbjct: 178 PGLLAGLMLIIAIYITARIKN--LPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGI 235

Query: 243 FTPTEAGGVGASGAFILGLVRRKLDGP---------------------KIREALLSATRT 281
           FTPTEA  V A  +F +     +  GP                       +  L  A + 
Sbjct: 236 FTPTEAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKL 295

Query: 282 AAAVFTVLIGALLFGYFLTITQSPQKLTEFLTGLGIGRYGVLALIMLMYLVLGCLMDAMA 341
              +  ++  AL+  + LT  + PQ +TE +   G+G    L ++ L+ LV G  M+   
Sbjct: 296 TIMLMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSG 355

Query: 342 MIILTVPIIYPVIVHLGFDPIWFGVIIVMTVELGLIHPPVGMNVFVIKSVVKDVSFTTIF 401
           ++++  P+++P+ + LG DPI  G+++V+ +E+G+I PPVG+N+FV   V K +S   + 
Sbjct: 356 LLVIVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAK-MSMMNVV 414

Query: 402 KGVLPFIVTDIVRLVILIAFPIIALWLPT 430
           K  LP++    + L+I+   P ++ WLPT
Sbjct: 415 KAALPWVGVMFLFLIIVTYVPWVSTWLPT 443