Pairwise Alignments

Query, 433 a.a., TRAP dicarboxylate transporter, DctM subunit, unknown substrate 3 from Variovorax sp. SCN45

Subject, 501 a.a., TRAP transporter, subunit DctM from Phaeobacter inhibens DSM 17395

 Score =  307 bits (786), Expect = 6e-88
 Identities = 153/355 (43%), Positives = 226/355 (63%), Gaps = 1/355 (0%)

Query: 6   VAVLGFVALFVLMLLRVPVGMAMGLVGVTGYSYLV-GPGPALKLVGQTSMRTVTDYTFGV 64
           + +  F  L +L+ LRVP+G++M LVG+ G   +  G   A   +   +  T + Y+  +
Sbjct: 6   IGIASFPVLMMLIFLRVPIGLSMFLVGLVGLIIVTDGTQVAFGRMKSETYSTFSSYSLTI 65

Query: 65  IPMFMLMGALVSVSGVSRELFKAANSMIGHLRGGLGVATVVACGGFAAICGSSVATAATF 124
           +PMF+LMG   ++ G+S  LFKAA   +GH +GG+ +A + AC GF AICGSS+ATAAT 
Sbjct: 66  VPMFLLMGHFATLGGMSTALFKAAEGFLGHKKGGVAMAAIGACAGFGAICGSSLATAATM 125

Query: 125 SAVAYPEMRRFNYPQSFSTGVIAAGGTLGAILPPSTVLAVYAILTQQDIGKLFMAGIVPG 184
             VA PE+R + Y   FST  +AAGGTLG ++PPS VL +YAILT+Q+I KLF+A  +PG
Sbjct: 126 GRVALPELRNYGYAGGFSTATLAAGGTLGILIPPSVVLVIYAILTEQNIAKLFLAAFIPG 185

Query: 185 ILAMAMYVMTIAIIVKLRPDWLPGGEIKPWSERVKDLKNVWAPLVLFVFVIGGLYGGFFT 244
           ILA   YV+ I+I V++ P         PW ER   L +VW  L++F  V+GG+Y G+FT
Sbjct: 186 ILAAIGYVIAISIYVRVFPGSAGTRPPVPWGERFAALFHVWPVLLVFGLVVGGIYLGWFT 245

Query: 245 PTEAGGVGASGAFILGLVRRKLDGPKIREALLSATRTAAAVFTVLIGALLFGYFLTITQS 304
           PTE   VGA G  ++  +   L+   + ++ +   R+ A +F +++GA  +  FL +T+ 
Sbjct: 246 PTEGAAVGALGTGLIAWLNGGLNRETLTDSFMVTARSTAMIFFIVLGAGFYNGFLALTKV 305

Query: 305 PQKLTEFLTGLGIGRYGVLALIMLMYLVLGCLMDAMAMIILTVPIIYPVIVHLGF 359
           PQ+L +F+   G+  + VL LI+  YLV GCLMD+++MI+LT+PI YPVI  + F
Sbjct: 306 PQELADFVVSQGLSPWMVLMLILAFYLVFGCLMDSLSMILLTIPIFYPVISAMDF 360