Pairwise Alignments

Query, 372 a.a., Uncharacterized UPF0118 membrane protein from Variovorax sp. SCN45

Subject, 368 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 60.5 bits (145), Expect = 7e-14
 Identities = 65/320 (20%), Positives = 145/320 (45%), Gaps = 27/320 (8%)

Query: 11  FLALLAAVTAAFIWVLLPFFGAVLWGVALAILFTPLFRWLLRKMPGKLNAAALLTLAICL 70
           F+ ++ A   A   +++PF    +    +A++  P    + +    K  A  LL   +C 
Sbjct: 19  FVVIILAGIKAASPIVVPF----VLSCFIAVICNPAIGLMTKYRVPKWLAVILL---MC- 70

Query: 71  FIVILPLAMVGVSLVQEVALVTQNIRSGQINFAAYFQQILDASPQWLLNLVERFNLGDMA 130
           FIV++ L +         +LV  +I         Y  Q+++    W+L+ ++  N+  ++
Sbjct: 71  FIVLMGLWLA--------SLVGSSINEFSKQLPQYRNQLVEQF-SWVLHKLQALNI-QIS 120

Query: 131 AWQARISAAAGQASQIIASQALAIGQNTFDFVVSFFVMLYLLYFLLRDGAALSKRMRDAV 190
             Q       G A  +  +    +G    + + + F+++  + F+L + ++L K++  A+
Sbjct: 121 KEQVLAYFDPGMALSMTTNMLSGVG----NVMANLFLIILTIVFMLFEASSLPKKLHLAL 176

Query: 191 PLAKPHTHYLLNKFTTVIRATVKGNVAVAIAQGTLGGLAFWFLGVQGALLWAVLMAFLSL 250
                    + ++F   +   +     V++A G + G+   F+GV  ALLWAV+    + 
Sbjct: 177 DDPDMRLQQI-DRFLQSVNQYMVIKTLVSLATGLIVGVGLAFIGVDYALLWAVIAFLFNY 235

Query: 251 LPAVGAALIWGP-VAIYFLATGHFWQGG-VLIFVGVFVIGLVDNILRPLLVGKDTQMPDY 308
           +P +G+ +   P V + F+  G    GG  ++++G  ++  + N++ P  +G+   +   
Sbjct: 236 IPNIGSIIAAIPAVLLAFIQLGPAAAGGTTMLYIGANMV--MGNVVEPKFMGRGLGLSTL 293

Query: 309 IVLMSTIGGMAIFGINGFVI 328
           +V +S I    + G  G ++
Sbjct: 294 VVFLSLIFWGWLLGSVGMLL 313