Pairwise Alignments

Query, 300 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 301 a.a., HTH-type transcriptional regulator, LysR family from Phaeobacter inhibens DSM 17395

 Score =  218 bits (556), Expect = 1e-61
 Identities = 116/293 (39%), Positives = 176/293 (60%)

Query: 1   MDRLLAMEMFVRVVETGSFSKAAREFNTTQPTVTKQVAATEARLKVRLLNRNTRGVSLTE 60
           MDRL  ME F  VV+ G F+ AA++   ++  V+K V++ EARL  RLLNR TR VS TE
Sbjct: 1   MDRLTEMEAFANVVDQGGFTDAAKKMGISKSAVSKHVSSLEARLGARLLNRTTRRVSPTE 60

Query: 61  PGALYYEKCKTIVREAEEADSIVQLRQNQAQGLLRVGTSVAFGRRVVVPLALEYMRRHPQ 120
            G  YY++ + ++ +A EAD++V   Q+   GLLR+  +  FG   + P+  +++R  P 
Sbjct: 61  IGLAYYDRARRVLNDAGEADALVTSMQSAPSGLLRISVATDFGVNHLSPVLSDFLRDFPD 120

Query: 121 VQLDLSFEDRYVDLIAQGIDVAIRMGKLADSSLGARYLGANPWVMVASPGYLKKHGTPKR 180
           + +++   +RYV+LI++G D+A+R+G+L DSSL AR L      M+ASP YL+K G P++
Sbjct: 121 ITVNMVLNNRYVELISEGFDMALRIGELEDSSLRARKLTETTKRMIASPAYLEKFGRPQK 180

Query: 181 AQDLSAHVALIYSSVVGDEFWRMHTPKGEPVTVPVSGRFRSNNLSAVLAAARDGLGIALM 240
             DL+ H  L YS+      W++  P GE   V  SG    N+  ++L AA  GLGIA +
Sbjct: 181 IDDLNMHKLLHYSNQSSGSMWKITAPSGEKRQVRTSGWLSVNDGQSLLNAAISGLGIAYL 240

Query: 241 PRYVASESLAAGKVHEVLGDHALPEQEIHAVFPSPKLVPGKVSGFVAFLQGRF 293
           P Y+ S+++A G V +V+    +  Q I+AV+P  +    KV  F+ FL   F
Sbjct: 241 PSYLYSDAMAEGLVEDVMPSLPMETQGIYAVYPPGRFTQPKVRAFIDFLANAF 293