Pairwise Alignments

Query, 300 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 293 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  172 bits (437), Expect = 6e-48
 Identities = 99/261 (37%), Positives = 145/261 (55%), Gaps = 5/261 (1%)

Query: 1   MDRLLAMEMFVRVVETGSFSKAAREFNTTQPTVTKQVAATEARLKVRLLNRNTRGVSLTE 60
           MD    +  F+ V E+  FS AAR+   +   V++QVA  E RL   L  R TR VSLT+
Sbjct: 1   MDSFEGIVEFIAVAESNGFSAAARQLGLSTSHVSRQVARLEVRLGCALFARTTRSVSLTQ 60

Query: 61  PGALYYEKCKTIVREAEEADSIVQLRQNQAQGLLRVGTSVAFGRRVVVPLALEYMRRHPQ 120
            G  YY +C+ ++    +A+  V  +Q Q  G LRV  + AF  + + P+ +++ R+HP 
Sbjct: 61  AGQGYYRQCQNLLVGLRQANEEVTQQQLQLSGTLRVSAAGAFAEQYIAPVLIDFARQHPA 120

Query: 121 VQLDLSFEDRYVDLIAQGIDVAIRMGKLADSSLGARYLGANPWVMVASPGYLKKHGTPKR 180
           + +++ F  R V+ + +GID AIR G L DS L AR L     + VASP YL + G PK 
Sbjct: 121 LTIEMDFNSRMVNFVEEGIDFAIRFGALKDSGLVARKLANRDMMAVASPQYLAEFGIPKT 180

Query: 181 AQDLSAHVALIYSSVVGDEFWRMHTPKGEPVTVPVSGRFRSNNLSAVLAAARDGLGIALM 240
            QDL  H  +I +    ++ W      GE +++ V GR+RSNN+ AV+AAA   LGIA +
Sbjct: 181 PQDLRLHSCIISN----NDHWLFQQGDGE-LSIKVEGRWRSNNVPAVIAAAEQHLGIAYL 235

Query: 241 PRYVASESLAAGKVHEVLGDH 261
           P+      LA G +  VL  +
Sbjct: 236 PKSSFIAPLAKGSLVPVLSSY 256