Pairwise Alignments

Query, 256 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 297 a.a., nitrate ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  112 bits (279), Expect = 1e-29
 Identities = 73/264 (27%), Positives = 126/264 (47%), Gaps = 19/264 (7%)

Query: 4   TKQIERWSPWLL-LVAVILLWQIICAGFEVSDFIFPSPLRIWNQFWEFKE----IIAGHA 58
           T+ +    P L+ L    L WQ+IC+  E S    P+P R+  + WE       I  G  
Sbjct: 40  TQTVTNLLPLLVTLTFFTLAWQLICSSPESS---LPAPSRVLEESWELIAHPFYIGQGVD 96

Query: 59  WRTFWVTMA-------GFGLAIVVGVLLGFVIGSSRIAYAAIYPLMTAFNALPKAAFVPI 111
              FW   A       G+ +A  VGV LG ++G S +A   + P+      +P  A++P+
Sbjct: 97  QGLFWHVFASLQRVALGYAMAAAVGVALGTLVGQSALAMRGLDPIFQVLRTVPPLAWLPL 156

Query: 112 LVVWFGIGAGPAILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGAKRWDVLMKIGLP 171
            +  F  G   AI   F+ + +PI++N A G+  +  + ++V +VL    ++   KI LP
Sbjct: 157 SLAAFQDGTPSAIFVIFITAIWPIIINTAVGIRNIPQDYQNVAKVLRLNSFEYFGKIMLP 216

Query: 172 RSMPYFFGSLKVAITLAFVGTTVSEMTAANEGIGYLLISAGSAMQMGLAFAGLMVVGAMA 231
            + PY F  L++ I L+++    +EM     GIG+ +  A ++  +      L+ VG + 
Sbjct: 217 AAAPYIFTGLRIGIGLSWLAIVAAEMLIGGVGIGFFIWDAWNSSLISDIIVALIYVGIVG 276

Query: 232 MLMYELFSVIEKHTTGWAHRGSQN 255
            L+  L +++ +  T    RG+ N
Sbjct: 277 FLLDRLIALVGRAVT----RGTAN 296