Pairwise Alignments

Query, 256 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 281 a.a., aliphatic sulfonate ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  101 bits (251), Expect = 2e-26
 Identities = 59/239 (24%), Positives = 116/239 (48%), Gaps = 6/239 (2%)

Query: 15  LLVAVILLWQIICAGFEVSDFIFPSPLRIWNQFWEFKEIIAGHAWRTFWVTMAGFGLA-- 72
           LL+A + LWQ       ++  +FPS   I +  W    I  G       +++   G A  
Sbjct: 41  LLIAFLALWQAASTAGWINPAVFPSVGAILSALWT--GISGGALLDDIAISLQRSGTAFV 98

Query: 73  --IVVGVLLGFVIGSSRIAYAAIYPLMTAFNALPKAAFVPILVVWFGIGAGPAILTAFLI 130
             +V+ + LG ++G  R    A+ P++  F      A  P+ ++  G+G    +   F  
Sbjct: 99  GAVVLAIPLGLLMGQVRAIENALDPVLQLFRQTSALALYPVFILLLGLGEASKVFVIFWA 158

Query: 131 SFFPIMVNIATGLATLEPELEDVLRVLGAKRWDVLMKIGLPRSMPYFFGSLKVAITLAFV 190
           + FP++++  +G+  ++ +L ++ RV GA R  V  ++ LP ++P  F  L+++ T A +
Sbjct: 159 TLFPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLPGAVPSIFVGLRLSATTALL 218

Query: 191 GTTVSEMTAANEGIGYLLISAGSAMQMGLAFAGLMVVGAMAMLMYELFSVIEKHTTGWA 249
               SEM  AN+GIG+ +++A    Q+ L FA + ++  + ++        ++    W+
Sbjct: 219 LLIASEMIGANKGIGFQVMNAQYNFQIPLMFAAIFILAGLGLVSNYALVFAQRRLCRWS 277