Pairwise Alignments

Query, 450 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 447 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  107 bits (268), Expect = 6e-28
 Identities = 82/272 (30%), Positives = 135/272 (49%), Gaps = 16/272 (5%)

Query: 173 MALVTCLGVILATPFVVKRGLKGVVATAEHAESIDVHERTTRLPLANVASEIRPLVNAVN 232
           + L+ CL V+L    +++R  + + A         +H +  R+ +     E+ PLV  +N
Sbjct: 162 LILILCLIVVLVV--LIERSFQPIQALKAAIALRSIH-KLDRIYVEKPTVELLPLVETLN 218

Query: 233 RAFDRLNEGYDRQERFLADAAHELRTPITTLQIHLERLPYDPLKVKLKQASARL------ 286
           +  + L + + R++RF   AAHEL+TP+T L+++ E       + +LKQ   R+      
Sbjct: 219 QLLNELEQAWQREKRFTRMAAHELKTPLTVLRVNAENALRSTNQEQLKQDLERIFKGIER 278

Query: 287 -ATLAEQLLDLQRLDRIASHDAQ-VDLKPLCERVAADIAPLAIMNRCTLSVDAPRPLLVR 344
              L  QLL L +++   +   Q V+L  + ++V AD+AP+A      LS       L  
Sbjct: 279 TDRLIHQLLMLAKVESTQTLRKQPVELANVIKQVIADLAPIAFKQDQQLSFHGESSRL-W 337

Query: 345 GDAPSLERALTNLIQNAIEHGGQGCDIQVRLWEPSG---FEVLDSGPGIPEADRERVVAP 401
           GD   L     NL+ NAI + G    I V L +  G     V D+G  I +  RE++   
Sbjct: 338 GDELLLGILFKNLLDNAIRYSGHSSQIAVELSDHDGEIEVRVSDTGAAIDDLTREKMFDN 397

Query: 402 FHRL-VPRGRGAGLGLHLVAEVARLHGGQLTI 432
           F+R    +G GAGLG+ +  ++A LHGGQ+ +
Sbjct: 398 FYRANSQKGDGAGLGMSICRDIAALHGGQVLL 429