Pairwise Alignments

Query, 227 a.a., Two-component transcriptional response regulator, LuxR family from Variovorax sp. SCN45

Subject, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  142 bits (359), Expect = 4e-39
 Identities = 83/218 (38%), Positives = 125/218 (57%), Gaps = 8/218 (3%)

Query: 1   MNLLLVEDDLDLGNGVRIALANQGMDVVWVRRLD----DALRTLDGGTFDMVLLDLGLPD 56
           M +L+VEDD+ LG  +  AL   G    WV  L     DAL       +D+++LDLGLP 
Sbjct: 1   MKILVVEDDVQLGQQILSALEQTG----WVPELAQDGIDALYRATAEEWDVIVLDLGLPK 56

Query: 57  GDGLDLLFRLRRDRQILPVLVLSARDALNDRLRSLDDGADDYLVKPFALAELLSRVRALA 116
            DGL +L  +R +    PV++LSARD L  R+  L+ GADDYL KPF + EL++R+RA  
Sbjct: 57  LDGLTVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQL 116

Query: 117 RRSYGFNDETIRMRGLALHEPTRGVIVDGEPVELSRCEFDLLALLLKRTGRVVTRRVMEE 176
           RR+ G     +++  L+L   T  V+  G+ V L+  E+ ++A  +    +V++R  + E
Sbjct: 117 RRASGNASPVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVE 176

Query: 177 QVLPGGQANGSNSLEVHISNLRRKIGQGYIRTVRGIGY 214
            +        SN++EV I  +R+KI    I+TVRG+GY
Sbjct: 177 HIYKQDFDRDSNTIEVFIGRIRKKIAPDVIKTVRGLGY 214