Pairwise Alignments

Query, 433 a.a., D-amino acid dehydrogenase (EC 1.4.99.6) from Variovorax sp. SCN45

Subject, 421 a.a., D-amino acid dehydrogenase small subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  461 bits (1186), Expect = e-134
 Identities = 230/417 (55%), Positives = 296/417 (70%), Gaps = 2/417 (0%)

Query: 1   MKVIVLGGGVIGTTTAYYLARSGAEVTLLDRQDGPAEETSFGNAGQVSPGYSTPWAAPGI 60
           M+V+VLG GV+G T+A+YLA++G +VT++DRQ   AEETSF NAGQ+S GYS+PWAAPGI
Sbjct: 2   MEVLVLGSGVVGLTSAWYLAQAGHDVTVVDRQPRGAEETSFANAGQISYGYSSPWAAPGI 61

Query: 61  PLKAIKWMFKKHAPLSIRPDGTLFQLRWMAAMLRNCSPEAYAVNKERMMRVAEYSRGCLQ 120
           P KA+KWM +KHAPL I+P      L WM  ML NC    Y VNK RM+ +A YSR CL+
Sbjct: 62  PQKALKWMLEKHAPLKIQPSLDPALLSWMGKMLLNCQLSRYQVNKSRMLAIANYSRECLK 121

Query: 121 QLRADTGLQYEQRTGGTLQLFRTQAQLDAVQRDIAVLEECGVPYELLDRDALASVEPALA 180
            L     L Y+ R  GTLQ+FR + QL A+++D+ +L + GV +ELL+     + EP LA
Sbjct: 122 ALNQTYSLDYQGRQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLA 181

Query: 181 GARDRLTGGLRLPNDETGDCHLFTRGLAEIARGLGVDFRFGQTIAGLETDGSRITGVRTT 240
             +++L GGL LP+DETGDC+LF + L E+A+  GV F F   I  L  +G +I GV+T 
Sbjct: 182 PVQEKLVGGLWLPDDETGDCYLFCQQLTELAKQQGVRFHFDCHIQQLVCEGKKIIGVQTD 241

Query: 241 TGKILTADRYVMAFGSYSRAAIASLGLDIPVYPVKGYSLTVPLLDESLAPQSTVLDETYK 300
            G +L AD YV+A GSYS + +  LG++IPVYPVKGYSLT+P++DE  APQSTV+DETYK
Sbjct: 242 LG-LLKADAYVVALGSYSTSLLKPLGIEIPVYPVKGYSLTLPIIDEKFAPQSTVMDETYK 300

Query: 301 VAVTRFDNRIRVGGMAELGGFDLRLNPARRATLEKVVTDLFP-GGDVPRATFWTGLRPMT 359
           VA+TRF +RIRV G AEL GFD  +  AR+AT+E V  DLFP GGD  +  FWTG RPMT
Sbjct: 301 VALTRFSDRIRVAGTAELAGFDPAIPEARKATIEMVARDLFPHGGDFAKGQFWTGFRPMT 360

Query: 360 PDSTPIVGGTRYANLFLNTGHGTLGWTMACGSGKLISDMVMGQRPEIRTDGLAMDRY 416
           PD TPI+G T Y NL+ NTGHGTLGWTMACGS  +++D++      +   GL + RY
Sbjct: 361 PDGTPIIGATPYTNLYTNTGHGTLGWTMACGSASILADVLTHGESPLSRLGLDLFRY 417