Pairwise Alignments

Query, 345 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

Subject, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 43.5 bits (101), Expect = 8e-09
 Identities = 42/149 (28%), Positives = 60/149 (40%), Gaps = 24/149 (16%)

Query: 59  KDEGLDVSIDTGAGSVASITRIASGVYQLGL-------GDISSLVEFNAQNPGTPMVQAV 111
           KD  +  S+++  GS+ ++  I SG    G+          +   EF  Q P    ++AV
Sbjct: 61  KDHNIRCSVESTGGSIYNVNTIRSGELDFGIVQSDWQYHGYNGTSEFAEQGP-YKKLRAV 119

Query: 112 YQYYNRAPFVIIGRKDRGVTADFKSLAGKKVAAAAVESTRRAWPMVARKQGMRADAFQWQ 171
           +  +   PF II R D G+  + K LAGK+V      S  RA   V        DAF W 
Sbjct: 120 FSMHTE-PFNIIARADSGI-ENVKDLAGKRVNIGNPGSGDRATMQVV------MDAFGWN 171

Query: 172 TTDF--------SARDNVMVRGDVDAATY 192
              F        S R   +    +DA  Y
Sbjct: 172 NDSFKLAAELKGSERSQALCDNKIDAFIY 200