Pairwise Alignments

Query, 219 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 219 a.a., cystine transport system permease protein from Caulobacter crescentus NA1000

 Score =  135 bits (341), Expect = 5e-37
 Identities = 73/186 (39%), Positives = 114/186 (61%), Gaps = 1/186 (0%)

Query: 15  LLHGAGLTVLLTVLTMLVAVPLGIVLALMRLSSSKALSGASQVFVEFFRNLPLILVVYWA 74
           LL GAG T++L+V+ M + V LG +LALMRLS S  L   + V+V  FR  PL++ ++  
Sbjct: 15  LLKGAGYTIVLSVIGMSIGVVLGFLLALMRLSRSALLRWPAGVYVSAFRGTPLLVQLFLI 74

Query: 75  FYVMPVLMHIEFSAFTTGLVALCLNVSAYNAETFRAGINSIRKGQMEAAIAMGMSRWQAM 134
           +Y +P    +E        +   LNV+AY+ E  R+ I ++ KGQ EAA  +GMSR Q +
Sbjct: 75  YYGLPQF-GLEMPPLVAAGIGFSLNVAAYSCEILRSAIAAVDKGQWEAASVLGMSRGQTL 133

Query: 135 KKVVIPQAWRRVLPVLASTWVSLFKDTSLVSVIAVGELAHVALQIRSSSFRVLEMLTAMA 194
           ++V++PQA R  +  L+++++SL KDTSL + I V EL   A  I + ++ +  +  A A
Sbjct: 134 RRVILPQAARTAVAPLSNSFISLVKDTSLAATIQVPELFRQAQLITARTYEIFTLYLAAA 193

Query: 195 VIYWLM 200
            IYW++
Sbjct: 194 AIYWIL 199