Pairwise Alignments

Query, 408 a.a., PQQ-dependent oxidoreductase, gdhB family from Variovorax sp. SCN45

Subject, 376 a.a., dehydgrogenase from Sinorhizobium meliloti 1021

 Score =  214 bits (544), Expect = 4e-60
 Identities = 131/364 (35%), Positives = 183/364 (50%), Gaps = 41/364 (11%)

Query: 47  PWRIAFLPDGRMLITEKIGRLYLATQSGQKLE-VTGVPPVLYENQNGLLGVYLAPSFSSD 105
           PW  A LPDG ML+TE+ GRL L +  G   E + GVP V  + Q GLL V L P F+++
Sbjct: 49  PWGAALLPDGDMLVTERPGRLRLVSAEGAVGEPIEGVPDVFAQGQGGLLDVALDPDFATN 108

Query: 106 GAIYLTYSEPGQIRGTSSLALARATLKIGAGTASLEDLKVIWH-DPVKGKGGQVGAAVAF 164
             +YL+++E  +  G ++ ++ R  L   A   +L D K+I+  +P        G+ +AF
Sbjct: 109 RTVYLSFAEERE--GGAATSVGRGRLNDDA--TALSDFKIIFRQEPAASGENHFGSRLAF 164

Query: 165 SPDQKFLFLTAGDRQRFTPAQDPNQPAGKILRLTLDGKPAPGNPMEGKTGARSVPVIDPP 224
           +PD K LF+T G+R     AQDP    G I+RL  DG     NP  G+ GA         
Sbjct: 165 APDGK-LFITLGERFDMQEAQDPANHLGTIVRLNPDGSIPDDNPFVGREGA--------- 214

Query: 225 RDTEAAKTAPVVRTYVFDGPNLTPSETWSSGHRTPYGLAFAPDGR-LWELEHGPRGGDEL 283
                                    E WS GHR     A  P+   LW  E GP GGDEL
Sbjct: 215 ------------------------DEIWSYGHRNVQSAAIHPETDVLWTAEMGPMGGDEL 250

Query: 284 NLIEPGKNYGWPLVSYAVNYDGVPIASPDTRPDLVKPVIYWTPVLAPGNLMFYSGAMFPQ 343
           N+ E GKNYGWP VS+  +Y G  I  P +RP+    +  WTPV++P  +MFY+G +F  
Sbjct: 251 NIPEAGKNYGWPAVSWGRHYTGERIPDPPSRPEFAGSIHSWTPVISPSGMMFYTGDLFAD 310

Query: 344 WKGSAFATGLVSRALHRIEVHGATATPAEHWTVGFRVRAVEQAPDGALWLIEDDHEGGLY 403
           W+G     GL    + R++  G   T  E  ++  R+R + QA DG++  + D   G + 
Sbjct: 311 WRGDLLIGGLSVGGIVRVQTDGQKVTGEEVLSLEARIRDLLQASDGSVLALIDAASGRIL 370

Query: 404 RLTP 407
           RL P
Sbjct: 371 RLRP 374