Pairwise Alignments

Query, 221 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 337 a.a., amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  134 bits (337), Expect = 2e-36
 Identities = 81/208 (38%), Positives = 116/208 (55%), Gaps = 8/208 (3%)

Query: 15  LLGGLGVTLLLSVLTAIGALVLGTALGLGRVYGAAWLRIPIVFYIDTQRAIPVLVILVWF 74
           LL GL +TL +S+L  I  +VLG   GL R+     LR   + YI+  R  P+LV +  +
Sbjct: 127 LLEGLWITLEVSMLAIIIGIVLGVVTGLARISVNPALRWLAITYIEIIRGSPLLVQVFLW 186

Query: 75  YFAVPILTGISFH--------PFWAALMALTLHIAAYVAEIVRAGIESIRPGQIRAALAL 126
           YF V  L    F         P W  +MAL +   AYVAEIVRAGI+S+  GQ+ AA +L
Sbjct: 187 YFVVGTLLNALFEKVGLSAIPPLWYGVMALAIFTGAYVAEIVRAGIQSVHRGQMEAARSL 246

Query: 127 GMSRAQIVRKVVLPQALVRMLPAFGSVLSITIKDTAIATVIAVPELMKRAETIAGQSYRP 186
           GMS AQ +RKV+LPQA  R++P         +KD+++  VIAV EL K    +   S +P
Sbjct: 247 GMSYAQSMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAVRELTKATREVVTTSLQP 306

Query: 187 IEVFTVVMVIYFIILFPGTRLIDALYKR 214
            E++ V  ++Y ++ F  +  +  L +R
Sbjct: 307 FELWIVCALLYLVLTFTLSLCVQYLERR 334