Pairwise Alignments

Query, 303 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (254), Expect = 1e-26
 Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 17/288 (5%)

Query: 2   NLHLLRLFVAVAESGSFSRAAEGLWISQPAVSKGIRELEHQLDLTLIERGTGKGFRLTEA 61
           +L  L +F AVA+ GS S+AA+ L ++Q A S  + +LE  L   L ER  GK   LT  
Sbjct: 4   SLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFER-QGKQMALTHW 62

Query: 62  GASLLTHARGIFAMERAALDDVRARVG-----VQRGSLTIGASTTVASYWLPPYVAAFCA 116
           G  L   A+      R   D  +  +G     +  G + +GAS T A + +P  ++   +
Sbjct: 63  GMWLRPKAK------RLLQDAQQIEMGFYDQHLLSGEIRLGASQTPAEHLVPDLISIIDS 116

Query: 117 AYPAVVPRVTVGNTQWVCEQLLECRIDMALVEGRVDEERIEVSEWKADPLTVVVATGSEL 176
            +P +   + V +T+ V E +L+ + D+ ++EGR D+ RI    W  D LT+V +     
Sbjct: 117 DFPEIRISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHHPF 176

Query: 177 PRR-AVTAEALGRQNWILREPGSGTRQATEALCAANGIAALPWMEMASNEAIARTVASGV 235
            +R +V+   L +  W+LRE G+GTR   +++          W E      +   VA+G 
Sbjct: 177 AKRESVSLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVANGP 236

Query: 236 GISMLPRVVVADMLALGTLRELKLAGASVLSRPL---YRLALKSRPLA 280
            ++ LP + V   +  G L  L +   + + R L   +R  ++  PLA
Sbjct: 237 YLTCLPYLDVERFIESGLLVALNVPELN-MERTLSFIWRADMEENPLA 283