Pairwise Alignments

Query, 276 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 70.1 bits (170), Expect = 5e-17
 Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 16/180 (8%)

Query: 3   TTKTLLAALLAAAFVGQAAAQTVPVPAPGTSARIDAIKKAGVLRAAVLSNPPWLVENTTG 62
           + KTLL  LL  AF   A A   P         +DAIK+ G LR  + +  PW + +  G
Sbjct: 12  SVKTLLTGLLGLAFTLPAVASDTP--------NLDAIKERGTLRVGMSTFVPWAMRDKQG 63

Query: 63  SGDAWAGPAWLLANEVAKQLGVKLQAVPVSHETKVPVLASNQADMTISPLSVTPERLKVV 122
                 G    +A  +A   G +++ VP + +  +P L + + D+ I  +SVTPER K V
Sbjct: 64  E---LIGFEIDVAKRLAADSGWQVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKSV 120

Query: 123 DFVT-YSRTALCVFGRADNPKVANA-KSVDDFNNPNITVAYFTGGGEENWVKKRFPNAKL 180
            F   YS + + +   A N K+A     ++DFN  N+ +A   G       ++ FP A +
Sbjct: 121 LFTAPYSHSGVQL---AANKKLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASV 177