Pairwise Alignments

Query, 276 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 265 a.a., ABC transporter periplasmic substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 52.8 bits (125), Expect = 8e-12
 Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 25/241 (10%)

Query: 22  AQTVPVPAPGTSARIDAIKKAGVLRAAVLSNPPWLVENTTGSGDAWAGPAWLLANEVAKQ 81
           A TV       S+  D I +  V+    LS PP+ + N     D   G    +A  +AK 
Sbjct: 17  AITVGAATASASSLDDIIARKKVMIGVDLSVPPFGITNEEMQPD---GLDVDVAKLLAKD 73

Query: 82  LGVKLQAVPVSHETKVPVLASNQADMTISPLSVTPERLKVVDFVT-YSRTALCVFGRADN 140
           LGV+L+ VPV+ ++++P L + + D  ++   +  ER   V F   Y      +      
Sbjct: 74  LGVELELVPVTGQSRIPSLQTGKVDFVVASFGIYTERALSVAFSNPYGGHRSIIIA---- 129

Query: 141 PKVANAKSVDDFNNPNITVAYFTGGGEENWVKKRFPNAKLRGVSTA---GTAAPVEEIMA 197
           PK A  KS+ D     + V   T        +K    A + G+        +  +  +++
Sbjct: 130 PKEATIKSLADLAGKRVGVPRGTAH------EKILSAANVEGMELVRFDDDSTTLNALVS 183

Query: 198 KRAD-ITPINRVPWQALNRKVKGLKVLPDANNCQDSTEMATPIGLAIDKNQPEYLNWLKA 256
            + D I  +N +  Q   R        PD    + +T + +  G+ + +N P+ L+WL  
Sbjct: 184 GQVDAIGTVNYIAAQLQER-------YPDRGFEEKTTYLQSFYGVGLRRNDPDLLHWLNT 236

Query: 257 V 257
           V
Sbjct: 237 V 237