Pairwise Alignments

Query, 276 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 248 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 8/120 (6%)

Query: 41  KAGVLRAAVLSNPPWLVENTTGSGDAWAGPAWLLANEVAKQLGVKLQAVPVSHETKVPVL 100
           K G L   V  + P  V    G      G    L +E+AK++ + ++         +  +
Sbjct: 30  KTGTLSVGVFKHAPPAVYGQNGE---LIGFEVELVSEIAKRMNLNVEFKEYMFSNLLNAV 86

Query: 101 ASNQADMTISPLSVTPERLKVVDFV-TYSRTALCVFGRADNPKVANAKSVDDFNNPNITV 159
           A+N+ D  IS +S++PER K+V F   YS T L V  R    K +  +++ D N   I V
Sbjct: 87  ANNEIDCAISDISISPEREKIVSFTRAYSHTELVVLVR----KESGIRTITDLNGKKIGV 142