Pairwise Alignments

Query, 276 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 273 a.a., amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 84.3 bits (207), Expect = 3e-21
 Identities = 79/260 (30%), Positives = 123/260 (47%), Gaps = 25/260 (9%)

Query: 6   TLLAALLAAAFVGQAAAQTVPVPAPGTSARIDAIKKAGVLRAAVLSNPPWLVENTTGSGD 65
           TLL  L+A + V  AA + +       S    A+K+ G LR    +  PW +++ +G   
Sbjct: 7   TLLGVLMAIS-VASAADRPLRDQLAEDSVIEQALKR-GTLRVGFSTFVPWAMQDKSG--- 61

Query: 66  AWAGPAWLLANEVAKQLGVKLQAVPVSHETKVPVLASNQADMTISPLSVTPERLKVVDF- 124
           A+ G    +A  +A+ LG+ L+ VP      +P L + + D+ I  +SV P R   V+F 
Sbjct: 62  AFVGFEVDVATRLAQDLGLNLELVPTKWSGIIPALLTGKFDVIIGGMSVKPVRSLKVNFT 121

Query: 125 VTYSRTALCVFGRADNPKVANAKSVDDFNNPNITVAYFTGGGEENWVKKRFPNAKLRGVS 184
           + Y   ++ V   A     A  KS+DDF+NP + V   TG       KKRFP A+LR   
Sbjct: 122 IPYDYASISVM--ASKSAAAGLKSLDDFDNPEVVVVARTGSTAALAAKKRFPKARLRYFD 179

Query: 185 TAGTAAPVEEIMAKRADITPINRVPWQALNRKVKGLKVL--PDANNCQDSTEMA-TPIGL 241
             G A  ++E+++ RA       V    L R     +VL  PD     +   +A  P+  
Sbjct: 180 DEGPA--IQEVLSGRAHAL----VSSDPLPR----FEVLANPDRLFMPEGKPLALEPVAF 229

Query: 242 AIDKNQPEYL----NWLKAV 257
           A+ K+ P+ L    NW++ V
Sbjct: 230 AVRKSDPDTLNVLDNWIRMV 249