Pairwise Alignments

Query, 167 a.a., Extracytoplasmic function (ECF) sigma factor VreI from Variovorax sp. SCN45

Subject, 186 a.a., RNA polymerase sigma factor, sigma-70 family from Pseudomonas stutzeri RCH2

 Score = 67.4 bits (163), Expect = 1e-16
 Identities = 50/145 (34%), Positives = 70/145 (48%), Gaps = 2/145 (1%)

Query: 24  LTRRLGSSDLAGDALHDTWVRL-AGKSEIEPVRQPQAFLLNAATNIAVDRLRVEARMLSE 82
           + R LGS+D A D   +T++R         P  + Q +LL  A N A+D LR   R +  
Sbjct: 35  IRRLLGSTDEAADLTQETFIRAYQALPRWRPEARLQTWLLQIARNAALDLLRQRQRHVVL 94

Query: 83  SQVDDLFEVEDPAAGPAEALEARFELAALVGAMERLPARQREILFAVRLEGLSRDELAER 142
           +  D+  E  DPA  P   L++  +L  L   + RLP  QREIL    +EGLS DELA  
Sbjct: 95  A-ADEQAEPIDPAPSPLRRLQSARDLEMLERLLARLPHEQREILLLREVEGLSYDELAAT 153

Query: 143 YGISVRMVARELQAAHEFCVRQMRR 167
             ++   V   L  A E  +   R+
Sbjct: 154 LQLNAGTVKSRLARAREALLHGYRQ 178