Pairwise Alignments

Query, 307 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  106 bits (265), Expect = 6e-28
 Identities = 94/305 (30%), Positives = 137/305 (44%), Gaps = 44/305 (14%)

Query: 4   LATLRAFEAVARLGSLSRAASELNVTKSAVSHQLRTLEADLGVSLLRRGGTVRRAQTTEA 63
           +A+L  F  VA+  S S AA+ L++T  A+S Q+  LEA LG SL  R    R  + TEA
Sbjct: 7   VASLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHS--RGVRLTEA 64

Query: 64  GAALLVSVQQALTLLETACSNARAGARGRRRNNLNISANPSLAALWLAPRIGRFVELHPD 123
           G  LL +VQ++   +E    +         R  + +   PS A  WL PR+  F   HP+
Sbjct: 65  GRILLTTVQRSYQDIEQTIHSL---VPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHPE 121

Query: 124 IDIQVFLHASQDPAWKAQDIDLAFLHVRSLGPHLAAPGDIPLMTETVVPVCSPALIAAHE 183
           I IQ F   +   + + +D DLA  +     P   A     LM E ++PV S   +AAH 
Sbjct: 122 IQIQTFAEGALVDS-ERRDYDLAIDYGALPYPRRDAQ---LLMEEWLLPVMSTNYLAAHS 177

Query: 184 RDDPRVFTRHRWLQEKHIDSP-------------------ETDWRTWRPRLGLPEDTGQD 224
                      WLQE   +S                    + +W  W  ++G+     +D
Sbjct: 178 -----------WLQEDWANSEAWQQVVLLHDAMPWANAARDQEWHYWAHQMGITLPERRD 226

Query: 225 PLVLSGLSTVVAAAAAGVGIALGRSPLIDEELAHGRLVALTPGLRMPGSWGYVMRIQPHR 284
               +     ++AA AGVGIA+ R+ L+  EL  GRLV  TP   +    GY   +  H+
Sbjct: 227 H-YFNRTDMAMSAAEAGVGIAMARTALLSNELDTGRLV--TPFAPIRAKAGYF--LITHQ 281

Query: 285 PMDAS 289
             DA+
Sbjct: 282 ATDAT 286