Pairwise Alignments

Query, 307 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 303 a.a., glycine cleavage system transcriptional activator, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  127 bits (319), Expect = 3e-34
 Identities = 97/306 (31%), Positives = 146/306 (47%), Gaps = 17/306 (5%)

Query: 1   MPPLATLRAFEAVARLGSLSRAASELNVTKSAVSHQLRTLEADLGVSLLRRGGTVRRAQT 60
           +PPL  ++AFEA AR  S +RAA EL VT++AVSHQ++ LE  LG+ L RR    R    
Sbjct: 5   LPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKN--RSLLL 62

Query: 61  TEAGAALLVSVQQALTLLETACSNARAGARGRRRNNLNISANPSLAALWLAPRIGRFVEL 120
           TE G +  + ++     L  A     A +      +L +S +PS A  WL PR+ +F E 
Sbjct: 63  TEEGQSYFLDIKDIFIQLADATDRLLARS---AIGSLTVSMSPSFAIQWLVPRLSKFSEK 119

Query: 121 HPDIDIQVFLHASQDPAWKAQDIDLAFLHVRSLGPHLAAPGDIPLMTETVVPVCSPALI- 179
           +P+ID+++      + +    D+D+A  +     P L A     L  E ++PVCSP L+ 
Sbjct: 120 NPEIDVRI-KAVDTEASSLTDDVDVAIYYGLGNWPGLRAD---KLRNEVLIPVCSPMLLN 175

Query: 180 AAHERDDPRVFTRHRWLQEKHIDSPETDWRTWRPRLGLPEDTGQDPLVLSGLSTVVAAAA 239
                  P     H  L     D    DW+ W  + G+ +       + S  S V+ AAA
Sbjct: 176 GPKPLSKPEDLKHHTLLH----DMSRHDWQAWFRQCGITDINVNQGPIFSHSSLVLQAAA 231

Query: 240 AGVGIALGRSPLIDEELAHGRLVALTPGLRMPGSWGYVMRIQPHRPMD---ASLPTLVEF 296
            G G+ALG S L   ++  GRLV     + +     Y++  Q H  +    A    +++ 
Sbjct: 232 HGQGVALGYSVLARPDIKAGRLVCPFQEVLVSKDAYYLVCQQNHAELGKVVAFREWMLDM 291

Query: 297 LAEEGR 302
            AEE R
Sbjct: 292 FAEESR 297