Pairwise Alignments

Query, 580 a.a., ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) / ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

Subject, 289 a.a., nitrate ABC transporter, permease protein from Pseudomonas stutzeri RCH2

 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 13/202 (6%)

Query: 371 IVWLGVLTALRVATMTVLATLIWVPVGVWIGSQPRVARFAQPLAQIGASFPVNMTFPIVV 430
           + W  + +  RVA   +LA +  V +GV IG      R   P+ Q+  + P     P+ +
Sbjct: 91  LAWQLLASLQRVAVGYLLAVVAGVGLGVLIGQSDWAMRGLDPIFQVLRTVPPLAWLPLSL 150

Query: 431 GFFVATHVTLNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARVYGLRDWNLWRTLI 490
             F  +H +    ++ +I +   W I+ N   G   IP D +  A+V  L  +  ++T++
Sbjct: 151 AGFQDSHPS----ALFVIFITAIWPIIINTAVGIRNIPQDYRNVAQVLQLNGFEYFKTIM 206

Query: 491 LPAIFPYWVTGACTAAGGAWNASIVAELATWGSTTLKADGLGAYI---ATVTREGDTALI 547
           LPA  PY  TG     G +W A I AE+   G       G+G +I      +R  D  L 
Sbjct: 207 LPAAAPYIFTGLRIGVGLSWLAIIAAEMLIGGV------GIGFFIWDAWNASRISDIILA 260

Query: 548 IASIGVMSIFVVLMNKLIWRRL 569
           +  IGV+   +  +   + +R+
Sbjct: 261 LVYIGVVGFVLDRLVAFVGQRI 282



 Score = 60.5 bits (145), Expect = 9e-14
 Identities = 62/262 (23%), Positives = 108/262 (41%), Gaps = 47/262 (17%)

Query: 20  IDALFLLVLLGLLWSALHFGKGMIVHFDPAAVPEIDSSPSQI----------PYYAG--- 66
           +  L +L++LG++W  L  G         AA+P     PSQ+          P+Y     
Sbjct: 39  VPPLVILLVLGVIWEMLCSGAD-------AALPP----PSQVVAETWELIIDPFYDNGGN 87

Query: 67  ---------RTLMRMWIAFGFSLFFAVATGYLAAKSRTARAFILPALDVLQSVPVLGFLS 117
                     +L R+ + +  ++   V  G L  +S  A   + P   VL++VP L +L 
Sbjct: 88  DVGLAWQLLASLQRVAVGYLLAVVAGVGLGVLIGQSDWAMRGLDPIFQVLRTVPPLAWLP 147

Query: 118 ATVAAFMALFPGSLLGVECAAIFAIFTGQVWNMAFGFYHSMVTIPNDMQEAASTYGLTRA 177
            ++A F    P        +A+F IF   +W +       +  IP D +  A    L   
Sbjct: 148 LSLAGFQDSHP--------SALFVIFITAIWPIIINTAVGIRNIPQDYRNVAQVLQLNGF 199

Query: 178 QRFRTVELPASAHSLIWNSMMSFGGGWFFVAQSEAISVMNKDIKLPGLGSYMAQAIAQGD 237
           + F+T+ LPA+A  +     +  G  W  +  +E +      I   G+G ++  A     
Sbjct: 200 EYFKTIMLPAAAPYIFTGLRIGVGLSWLAIIAAEML------IGGVGIGFFIWDAWNASR 253

Query: 238 NTAALWAVVAMIVLILVSDQLV 259
            +  + A+V + V+  V D+LV
Sbjct: 254 ISDIILALVYIGVVGFVLDRLV 275