Pairwise Alignments

Query, 407 a.a., Two-component system sensor histidine kinase/response regulator hybrid from Variovorax sp. SCN45

Subject, 803 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  124 bits (312), Expect = 8e-33
 Identities = 77/239 (32%), Positives = 128/239 (53%), Gaps = 7/239 (2%)

Query: 157 HTQRELERAVRMRDDFMSMVSHELRTPLNTLYLEAQLRQLHLSKGNLANFTPERLPSMIE 216
           H   E +R  R++ +F+S VSHELRTPL ++        L L   N+    PE +  +++
Sbjct: 561 HDITERKRIERLQREFISTVSHELRTPLTSI-----TGALGLICSNVMGEVPEAMHELLD 615

Query: 217 RDQRQIRNMVRLIDDMLDVTRMRRDALSIQTKPVDLSALSRAVVENLRQQAEAAGSPITL 276
             Q+  + +  LIDD+LD+ ++    +        L       + + R  AE  G  + L
Sbjct: 616 IAQQNSQRLNALIDDLLDMDKLHAGKMRFALLRQPLQPQLELALRSNRNYAEQHGVVLQL 675

Query: 277 QTPAELRGVWDEFRIEQVLTNLLTNALRYG-SGKPVEMTVSLEGDTARVAVRDQGIGIAP 335
                +    D  R++QVL+NLL+NA ++  +G+ VE++ +L     R++VRD+G GI+ 
Sbjct: 676 GACPAVTVEIDAMRLQQVLSNLLSNAAKFSPAGEQVELSATLSDGRVRISVRDRGPGISA 735

Query: 336 EDHARIFEQFERTDDS-RRHAAGLGLGLYITRKIVSLHAGHIGVESAPGEGSRFVVDLP 393
           +   R+F++F + D S  R   G GLGL I+++++    G IG ES PG G+ F  +LP
Sbjct: 736 DFRERVFQKFAQADSSDSRQQGGTGLGLAISKELIERMGGQIGFESEPGHGACFWFELP 794